RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 REM2Q8IYK8 340 aaPredicted RBP19.68■□□□□ 0.74
SF3A3-203ENST00000461869 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
SF3A3-203ENST00000461869 MYOZ2Q9NPC6 264 aa19.68■□□□□ 0.74
SF3A3-203ENST00000461869 XDHP47989 1333 aa19.68■□□□□ 0.74
SF3A3-203ENST00000461869 ZNF609O15014 1411 aa19.68■□□□□ 0.74
SF3A3-203ENST00000461869 USP17L3A6NCW0 530 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 USP17L4A6NCW7 530 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
SF3A3-203ENST00000461869 FKBP1BP68106 108 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 USP17L1Q7RTZ2 530 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 PODNQ7Z5L7 613 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 RASAL3Q86YV0 1011 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 GMLQ99445 158 aa19.67■□□□□ 0.74
SF3A3-203ENST00000461869 METTL22Q9BUU2 404 aaPredicted RBP19.67■□□□□ 0.74
SF3A3-203ENST00000461869 DDX58O95786 925 aaKnown RBP19.66■□□□□ 0.74
SF3A3-203ENST00000461869 SOX10P56693 466 aa19.65■□□□□ 0.74
SF3A3-203ENST00000461869 C8orf58Q8NAV2 365 aa19.65■□□□□ 0.74
SF3A3-203ENST00000461869 SCAF8Q9UPN6 1271 aaKnown RBP19.65■□□□□ 0.74
SF3A3-203ENST00000461869 PITPNM2Q9BZ72 1349 aa19.65■□□□□ 0.74
SF3A3-203ENST00000461869 CCDC30Q5VVM6 783 aa19.64■□□□□ 0.73
SF3A3-203ENST00000461869 CTU1Q7Z7A3 348 aaKnown RBP19.64■□□□□ 0.73
SF3A3-203ENST00000461869 CDC5LQ99459 802 aaKnown RBP19.64■□□□□ 0.73
SF3A3-203ENST00000461869 AKAP11Q9UKA4 1901 aa19.63■□□□□ 0.73
SF3A3-203ENST00000461869 WTIPA6NIX2 430 aaPredicted RBP19.63■□□□□ 0.73
SF3A3-203ENST00000461869 RARSP54136 660 aaKnown RBP19.63■□□□□ 0.73
SF3A3-203ENST00000461869 CTSWP56202 376 aa19.63■□□□□ 0.73
SF3A3-203ENST00000461869 ERICH6BQ5W0A0 696 aa19.63■□□□□ 0.73
SF3A3-203ENST00000461869 MOB2Q70IA6 237 aa19.63■□□□□ 0.73
SF3A3-203ENST00000461869 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
SF3A3-203ENST00000461869 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
SF3A3-203ENST00000461869 UBE2Q2LH0YL09 131 aa19.62■□□□□ 0.73
SF3A3-203ENST00000461869 PRAMEF18Q5VWM3 479 aa19.62■□□□□ 0.73
SF3A3-203ENST00000461869 MINPP1Q9UNW1 487 aa19.62■□□□□ 0.73
SF3A3-203ENST00000461869 PAPPA2Q9BXP8 1791 aa19.62■□□□□ 0.73
SF3A3-203ENST00000461869 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
SF3A3-203ENST00000461869 NBPF9Q3BBW0 867 aa19.61■□□□□ 0.73
SF3A3-203ENST00000461869 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
SF3A3-203ENST00000461869 OGFOD1Q8N543 542 aa19.61■□□□□ 0.73
SF3A3-203ENST00000461869 TTLL11Q8NHH1 800 aa19.61■□□□□ 0.73
SF3A3-203ENST00000461869 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
SF3A3-203ENST00000461869 BSDC1Q9NW68 430 aaPredicted RBP19.61■□□□□ 0.73
SF3A3-203ENST00000461869 MED23Q9ULK4 1368 aa19.6■□□□□ 0.73
SF3A3-203ENST00000461869 IGKV5-2P06315 115 aa19.6■□□□□ 0.73
SF3A3-203ENST00000461869 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
SF3A3-203ENST00000461869 KSR2Q6VAB6 950 aa19.6■□□□□ 0.73
SF3A3-203ENST00000461869 MXD3Q9BW11 206 aa19.6■□□□□ 0.73
SF3A3-203ENST00000461869 GREM2Q9H772 168 aa19.6■□□□□ 0.73
SF3A3-203ENST00000461869 PSME4Q14997 1843 aa19.6■□□□□ 0.73
SF3A3-203ENST00000461869 PI4KAP2A4QPH2 592 aa19.59■□□□□ 0.73
SF3A3-203ENST00000461869 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
SF3A3-203ENST00000461869 DACT2Q5SW24 774 aa19.59■□□□□ 0.73
SF3A3-203ENST00000461869 PI4KAP1Q8N8J0 262 aa19.59■□□□□ 0.73
SF3A3-203ENST00000461869 HDAC9Q9UKV0 1011 aa19.59■□□□□ 0.73
SF3A3-203ENST00000461869 KIF16BQ96L93 1317 aa19.58■□□□□ 0.73
SF3A3-203ENST00000461869 WNT10BO00744 389 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 TBC1D8O95759 1140 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 NF2P35240 595 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 NEXNQ0ZGT2 675 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 STRIP1Q5VSL9 837 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 TSPYL6Q8N831 410 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 COA1Q9GZY4 146 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.72
SF3A3-203ENST00000461869 MYO3BQ8WXR4 1341 aa19.57■□□□□ 0.72
SF3A3-203ENST00000461869 VAMP4O75379 141 aa19.57■□□□□ 0.72
SF3A3-203ENST00000461869 PKN2Q16513 984 aaKnown RBP19.57■□□□□ 0.72
SF3A3-203ENST00000461869 ZNF296Q8WUU4 475 aaPredicted RBP19.57■□□□□ 0.72
SF3A3-203ENST00000461869 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
SF3A3-203ENST00000461869 TM4SF4P48230 202 aa19.56■□□□□ 0.72
SF3A3-203ENST00000461869 CWF19L2Q2TBE0 894 aaKnown RBP19.56■□□□□ 0.72
SF3A3-203ENST00000461869 LEMD3Q9Y2U8 911 aa19.56■□□□□ 0.72
SF3A3-203ENST00000461869 BCAR3O75815 825 aa19.55■□□□□ 0.72
SF3A3-203ENST00000461869 SASH1O94885 1247 aa19.55■□□□□ 0.72
SF3A3-203ENST00000461869 IGHMBP2P38935 993 aaKnown RBP19.55■□□□□ 0.72
SF3A3-203ENST00000461869 MKRN3Q13064 507 aaKnown RBP19.55■□□□□ 0.72
SF3A3-203ENST00000461869 TXNRD3Q86VQ6 643 aa19.55■□□□□ 0.72
SF3A3-203ENST00000461869 STK31Q9BXU1 1019 aa19.55■□□□□ 0.72
SF3A3-203ENST00000461869 NEURL1BA8MQ27 555 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 MS4A1P11836 297 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 MMP14P50281 582 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 TTLL5Q6EMB2 1281 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 SSH1Q8WYL5 1049 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 PCDH10Q9P2E7 1040 aa19.54■□□□□ 0.72
SF3A3-203ENST00000461869 ZNF804BA4D1E1 1349 aa19.53■□□□□ 0.72
SF3A3-203ENST00000461869 H7C1W4 665 aa19.53■□□□□ 0.72
SF3A3-203ENST00000461869 GPR25O00155 361 aa19.53■□□□□ 0.72
SF3A3-203ENST00000461869 ARMC9Q7Z3E5 817 aa19.53■□□□□ 0.72
SF3A3-203ENST00000461869 KIAA0825Q8IV33 1275 aa19.53■□□□□ 0.72
SF3A3-203ENST00000461869 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
SF3A3-203ENST00000461869 PTPN12Q05209 780 aaKnown RBP19.52■□□□□ 0.72
SF3A3-203ENST00000461869 SREBF2Q12772 1141 aa19.52■□□□□ 0.72
SF3A3-203ENST00000461869 PRKG1Q13976 671 aa19.52■□□□□ 0.72
SF3A3-203ENST00000461869 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
SF3A3-203ENST00000461869 APOBEC3FQ8IUX4 373 aaKnown RBP19.52■□□□□ 0.72
SF3A3-203ENST00000461869 ANKRD2Q9GZV1 360 aa19.52■□□□□ 0.72
SF3A3-203ENST00000461869 SPEF2Q9C093 1822 aa19.51■□□□□ 0.71
SF3A3-203ENST00000461869 ITGA6P23229 1130 aa19.51■□□□□ 0.71
SF3A3-203ENST00000461869 KLRK1P26718 216 aa19.51■□□□□ 0.71
SF3A3-203ENST00000461869 GTF2IP78347 998 aa19.51■□□□□ 0.71
SF3A3-203ENST00000461869 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms