RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 PHC3Q8NDX5 983 aa9.48□□□□□ -0.89
LRCH3-210ENST00000461674 ARNT2Q9HBZ2 717 aa9.48□□□□□ -0.89
LRCH3-210ENST00000461674 IFRD1O00458 451 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-210ENST00000461674 IL2RAP01589 272 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 FAM160A1Q05DH4 1040 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-210ENST00000461674 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 ZNF700Q9H0M5 742 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 ARHGEF10LQ9HCE6 1279 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 PPT2Q9UMR5 302 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 FNDC3AQ9Y2H6 1198 aaKnown RBP9.47□□□□□ -0.89
LRCH3-210ENST00000461674 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
LRCH3-210ENST00000461674 MICAL2O94851 1124 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 SOX5P35711 763 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 COPS2P61201 443 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 FXNQ16595 210 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 HIF1AQ16665 826 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 SNAP47Q5SQN1 464 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 SV2BQ7L1I2 683 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 OR6P1Q8NGX9 317 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 CAAP1Q9H8G2 361 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 BCS1LQ9Y276 419 aa9.46□□□□□ -0.9
LRCH3-210ENST00000461674 TGFBR3LH3BV60 316 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 TK2O00142 265 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 LILRA1O75019 489 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 SCGB1D2O95969 90 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 CRKP46108 304 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 SYCP2LQ5T4T6 812 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 GLIS3Q8NEA6 775 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 SENP7Q9BQF6 1050 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 SFMBT1Q9UHJ3 866 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 HRH3Q9Y5N1 445 aa9.45□□□□□ -0.9
LRCH3-210ENST00000461674 SNPHO15079 494 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
LRCH3-210ENST00000461674 PF4P02776 101 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-210ENST00000461674 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
LRCH3-210ENST00000461674 LIG3P49916 1009 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 LMNB2Q03252 620 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 MCL1Q07820 350 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 FOXD4Q12950 439 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-210ENST00000461674 SEPT6Q14141 434 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
LRCH3-210ENST00000461674 CTC1Q2NKJ3 1217 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 PPP4R4Q6NUP7 873 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 NIM1KQ8IY84 436 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 GOLM1Q8NBJ4 401 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 ZSWIM2Q8NEG5 633 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 NINJ1Q92982 152 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-210ENST00000461674 ESYT1Q9BSJ8 1104 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 SLC6A16Q9GZN6 736 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 WASHC2CQ9Y4E1 1318 aa9.44□□□□□ -0.9
LRCH3-210ENST00000461674 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 MYCLP1P12525 358 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-210ENST00000461674 ATF3P18847 181 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 BCAMP50895 628 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 NFKB2Q00653 900 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 SSRP1Q08945 709 aaKnown RBP9.43□□□□□ -0.9
LRCH3-210ENST00000461674 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 CT47A1Q5JQC4 288 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-210ENST00000461674 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 LRRC3Q9BY71 257 aa9.43□□□□□ -0.9
LRCH3-210ENST00000461674 ROBO2Q9HCK4 1378 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 RASGRP1O95267 797 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 FSHRP23945 695 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 CAMK2GQ13555 558 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-210ENST00000461674 LRRC41Q15345 812 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
LRCH3-210ENST00000461674 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-210ENST00000461674 CRBNQ96SW2 442 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 ELP3Q9H9T3 547 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 AVENQ9NQS1 362 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-210ENST00000461674 PFDN2Q9UHV9 154 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 TLR6Q9Y2C9 796 aa9.42□□□□□ -0.9
LRCH3-210ENST00000461674 A0A087X0B3 334 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 KIAA0319Q5VV43 1072 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 IER5Q5VY09 327 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 MYO1HQ8N1T3 1032 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 FERD3LQ96RJ6 166 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 CHRDQ9H2X0 955 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 CHST12Q9NRB3 414 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
LRCH3-210ENST00000461674 GJB6O95452 261 aa9.4□□□□□ -0.9
LRCH3-210ENST00000461674 BPNT1O95861 308 aa9.4□□□□□ -0.9
LRCH3-210ENST00000461674 FOSP01100 380 aaPredicted RBP9.4□□□□□ -0.9
LRCH3-210ENST00000461674 VEGFBP49765 207 aa9.4□□□□□ -0.9
LRCH3-210ENST00000461674 TRIP4Q15650 581 aaPredicted RBP9.4□□□□□ -0.9
LRCH3-210ENST00000461674 SEZ6Q53EL9 994 aa9.4□□□□□ -0.9
LRCH3-210ENST00000461674 NBPF10Q6P3W6 841 aaKnown RBP9.4□□□□□ -0.9
LRCH3-210ENST00000461674 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms