RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
COL5A3-202ENST00000461214 CNNM1Q9NRU3 951 aa17.82■□□□□ 0.44
COL5A3-202ENST00000461214 PA2G4Q9UQ80 394 aaKnown RBP17.82■□□□□ 0.44
COL5A3-202ENST00000461214 SURF6O75683 361 aaKnown RBP17.81■□□□□ 0.44
COL5A3-202ENST00000461214 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
COL5A3-202ENST00000461214 SOGA3Q5TF21 947 aa17.81■□□□□ 0.44
COL5A3-202ENST00000461214 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
COL5A3-202ENST00000461214 DCTPP1Q9H773 170 aa17.81■□□□□ 0.44
COL5A3-202ENST00000461214 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
COL5A3-202ENST00000461214 AKAP11Q9UKA4 1901 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 RAB11FIP3O75154 756 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 G3BP1Q13283 466 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL5A3-202ENST00000461214 ATG9AQ7Z3C6 839 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 SMC5Q8IY18 1101 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 BEGAINQ9BUH8 593 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 SIL1Q9H173 461 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
COL5A3-202ENST00000461214 TSKSQ9UJT2 592 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
COL5A3-202ENST00000461214 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
COL5A3-202ENST00000461214 MAP1SQ66K74 1059 aaPredicted RBP17.79■□□□□ 0.44
COL5A3-202ENST00000461214 ANKRD2Q9GZV1 360 aa17.79■□□□□ 0.44
COL5A3-202ENST00000461214 EXOC6BQ9Y2D4 811 aa17.79■□□□□ 0.44
COL5A3-202ENST00000461214 DOCK2Q92608 1830 aa17.79■□□□□ 0.44
COL5A3-202ENST00000461214 XDHP47989 1333 aa17.78■□□□□ 0.44
COL5A3-202ENST00000461214 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
COL5A3-202ENST00000461214 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
COL5A3-202ENST00000461214 VGLL2Q8N8G2 317 aa17.78■□□□□ 0.44
COL5A3-202ENST00000461214 KIF1BPQ96EK5 621 aa17.78■□□□□ 0.44
COL5A3-202ENST00000461214 PUS3Q9BZE2 481 aaKnown RBP17.78■□□□□ 0.44
COL5A3-202ENST00000461214 LTBP3Q9NS15 1303 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 MAST2Q6P0Q8 1798 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 IGHDP01880 384 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 CHRNDQ07001 517 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 METTL24Q5JXM2 366 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 C7orf43Q8WVR3 580 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 PODXL2Q9NZ53 605 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 MINPP1Q9UNW1 487 aa17.77■□□□□ 0.44
COL5A3-202ENST00000461214 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
COL5A3-202ENST00000461214 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
COL5A3-202ENST00000461214 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
COL5A3-202ENST00000461214 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
COL5A3-202ENST00000461214 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
COL5A3-202ENST00000461214 CEP126Q9P2H0 1117 aa17.76■□□□□ 0.43
COL5A3-202ENST00000461214 HACL1Q9UJ83 578 aa17.76■□□□□ 0.43
COL5A3-202ENST00000461214 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
COL5A3-202ENST00000461214 ZNF541Q9H0D2 1346 aa17.75■□□□□ 0.43
COL5A3-202ENST00000461214 SCN4AP35499 1836 aa17.75■□□□□ 0.43
COL5A3-202ENST00000461214 SASH1O94885 1247 aa17.75■□□□□ 0.43
COL5A3-202ENST00000461214 PDE8BO95263 885 aa17.75■□□□□ 0.43
COL5A3-202ENST00000461214 EPHX2P34913 555 aa17.75■□□□□ 0.43
COL5A3-202ENST00000461214 PUM3Q15397 648 aaKnown RBP17.75■□□□□ 0.43
COL5A3-202ENST00000461214 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
COL5A3-202ENST00000461214 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
COL5A3-202ENST00000461214 CAPNS2Q96L46 248 aa17.74■□□□□ 0.43
COL5A3-202ENST00000461214 AKAP2Q9Y2D5 859 aa17.74■□□□□ 0.43
COL5A3-202ENST00000461214 MED23Q9ULK4 1368 aa17.74■□□□□ 0.43
COL5A3-202ENST00000461214 TFCP2Q12800 502 aa17.73■□□□□ 0.43
COL5A3-202ENST00000461214 UBE4AQ14139 1066 aa17.73■□□□□ 0.43
COL5A3-202ENST00000461214 MCOLN1Q9GZU1 580 aa17.73■□□□□ 0.43
COL5A3-202ENST00000461214 ANKIB1Q9P2G1 1089 aa17.73■□□□□ 0.43
COL5A3-202ENST00000461214 ZBTB47Q9UFB7 747 aaPredicted RBP17.73■□□□□ 0.43
COL5A3-202ENST00000461214 LEMD3Q9Y2U8 911 aa17.73■□□□□ 0.43
COL5A3-202ENST00000461214 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 GPSM2P81274 684 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 CYP4F22Q6NT55 531 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-202ENST00000461214 CLASRPQ8N2M8 674 aaKnown RBP17.72■□□□□ 0.43
COL5A3-202ENST00000461214 MPNDQ8N594 471 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 SUPT20HQ8NEM7 779 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-202ENST00000461214 PSMD1Q99460 953 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 RTFDC1Q9BY42 306 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-202ENST00000461214 GGA1Q9UJY5 639 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
COL5A3-202ENST00000461214 FGFR2P21802 821 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 ECE1P42892 770 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 KCNJ4P48050 445 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 FMR1Q06787 632 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL5A3-202ENST00000461214 ATP2B3Q16720 1220 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 TNNI3KQ59H18 835 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.43
COL5A3-202ENST00000461214 LPIN2Q92539 896 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
COL5A3-202ENST00000461214 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
COL5A3-202ENST00000461214 FPGT-TNNI3KV9GXZ4 949 aa17.71■□□□□ 0.43
COL5A3-202ENST00000461214 ZNF804BA4D1E1 1349 aa17.71■□□□□ 0.42
COL5A3-202ENST00000461214 APBB1O00213 710 aa17.7■□□□□ 0.42
COL5A3-202ENST00000461214 UFL1O94874 794 aa17.7■□□□□ 0.42
COL5A3-202ENST00000461214 SLC5A1P13866 664 aa17.7■□□□□ 0.42
COL5A3-202ENST00000461214 NUCB1Q02818 461 aa17.7■□□□□ 0.42
COL5A3-202ENST00000461214 C15orf52Q6ZUT6 534 aaKnown RBP17.7■□□□□ 0.42
COL5A3-202ENST00000461214 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 TAF5LO75529 589 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms