RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 PUM3Q15397 648 aaKnown RBP13.73□□□□□ -0.21
APTX-209ENST00000460940 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 RPAP2Q8IXW5 612 aaPredicted RBP13.73□□□□□ -0.21
APTX-209ENST00000460940 COA1Q9GZY4 146 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 SIL1Q9H173 461 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 PA2G4Q9UQ80 394 aaKnown RBP13.73□□□□□ -0.21
APTX-209ENST00000460940 IRS2Q9Y4H2 1338 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
APTX-209ENST00000460940 TNIP1Q15025 636 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 PODNQ7Z5L7 613 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
APTX-209ENST00000460940 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 CEP126Q9P2H0 1117 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
APTX-209ENST00000460940 HMMRO75330 724 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
APTX-209ENST00000460940 ZNF526Q8TF50 670 aaPredicted RBP13.72□□□□□ -0.21
APTX-209ENST00000460940 YDJCA8MPS7 323 aa13.71□□□□□ -0.21
APTX-209ENST00000460940 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.21
APTX-209ENST00000460940 CIAPIN1Q6FI81 312 aa13.71□□□□□ -0.21
APTX-209ENST00000460940 ZNF609O15014 1411 aa13.71□□□□□ -0.22
APTX-209ENST00000460940 DDNO94850 711 aaPredicted RBP13.7□□□□□ -0.22
APTX-209ENST00000460940 FGFR2P21802 821 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 KLRK1P26718 216 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 CXCL9Q07325 125 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 AAMPQ13685 434 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 LPIN2Q92539 896 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 SNAP23O00161 211 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
APTX-209ENST00000460940 SLC5A1P13866 664 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 TXNRD3Q86VQ6 643 aa13.7□□□□□ -0.22
APTX-209ENST00000460940 RAD17O75943 681 aa13.69□□□□□ -0.22
APTX-209ENST00000460940 ATP2B3Q16720 1220 aa13.69□□□□□ -0.22
APTX-209ENST00000460940 CRBNQ96SW2 442 aa13.69□□□□□ -0.22
APTX-209ENST00000460940 AKAP2Q9Y2D5 859 aa13.69□□□□□ -0.22
APTX-209ENST00000460940 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
APTX-209ENST00000460940 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
APTX-209ENST00000460940 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
APTX-209ENST00000460940 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
APTX-209ENST00000460940 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
APTX-209ENST00000460940 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
APTX-209ENST00000460940 CAVIN4Q5BKX8 364 aa13.68□□□□□ -0.22
APTX-209ENST00000460940 NMRK2Q9NPI5 230 aa13.68□□□□□ -0.22
APTX-209ENST00000460940 SCN4AP35499 1836 aa13.68□□□□□ -0.22
APTX-209ENST00000460940 PSME4Q14997 1843 aa13.68□□□□□ -0.22
APTX-209ENST00000460940 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 PSMD14O00487 310 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 IL1R1P14778 569 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 LMOD1P29536 600 aaPredicted RBP13.67□□□□□ -0.22
APTX-209ENST00000460940 HIBADHP31937 336 aaKnown RBP13.67□□□□□ -0.22
APTX-209ENST00000460940 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 ERC1Q8IUD2 1116 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
APTX-209ENST00000460940 TFCP2Q12800 502 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
APTX-209ENST00000460940 GPR108Q9NPR9 543 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
APTX-209ENST00000460940 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
APTX-209ENST00000460940 GYG1P46976 350 aa13.66□□□□□ -0.22
APTX-209ENST00000460940 GMPSP49915 693 aaPredicted RBP13.66□□□□□ -0.22
APTX-209ENST00000460940 FBXO33Q7Z6M2 555 aa13.66□□□□□ -0.22
APTX-209ENST00000460940 DPF2Q92785 391 aa13.66□□□□□ -0.22
APTX-209ENST00000460940 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
APTX-209ENST00000460940 KIF3CO14782 793 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 ZBTB22O15209 634 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 SCNN1DP51172 638 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 RSBN1LQ6PCB5 846 aaPredicted RBP13.65□□□□□ -0.22
APTX-209ENST00000460940 AGBL3Q8NEM8 1001 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 GPRC5DQ9NZD1 345 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 POTECB2RU33 542 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 SASH1O94885 1247 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
APTX-209ENST00000460940 TDRD7Q8NHU6 1098 aaKnown RBP13.65□□□□□ -0.22
APTX-209ENST00000460940 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
APTX-209ENST00000460940 A0A1B0GUL7 405 aa13.64□□□□□ -0.23
APTX-209ENST00000460940 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
APTX-209ENST00000460940 MMP14P50281 582 aa13.64□□□□□ -0.23
APTX-209ENST00000460940 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
APTX-209ENST00000460940 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
APTX-209ENST00000460940 GNL3LQ9NVN8 582 aaKnown RBP13.64□□□□□ -0.23
APTX-209ENST00000460940 EXOC6BQ9Y2D4 811 aa13.64□□□□□ -0.23
APTX-209ENST00000460940 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
APTX-209ENST00000460940 ZNF646O15015 1829 aaPredicted RBP13.63□□□□□ -0.23
APTX-209ENST00000460940 EPHX2P34913 555 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
APTX-209ENST00000460940 SEMA3EO15041 775 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 BCAMP50895 628 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 GTF2IP78347 998 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms