RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 UBE4AQ14139 1066 aa22.2■■□□□ 1.14
PLOD3-209ENST00000460475 PNMA8AQ86V59 439 aaPredicted RBP22.2■■□□□ 1.14
PLOD3-209ENST00000460475 ZNF609O15014 1411 aa22.2■■□□□ 1.14
PLOD3-209ENST00000460475 ADAMTSL1Q8N6G6 1762 aa22.2■■□□□ 1.14
PLOD3-209ENST00000460475 EYA2O00167 538 aa22.19■■□□□ 1.14
PLOD3-209ENST00000460475 ZBTB7BO15156 539 aaPredicted RBP22.19■■□□□ 1.14
PLOD3-209ENST00000460475 RPS12P25398 132 aaKnown RBP22.19■■□□□ 1.14
PLOD3-209ENST00000460475 VGLL2Q8N8G2 317 aa22.19■■□□□ 1.14
PLOD3-209ENST00000460475 PLIN1O60240 522 aa22.18■■□□□ 1.14
PLOD3-209ENST00000460475 POTEIP0CG38 1075 aa22.18■■□□□ 1.14
PLOD3-209ENST00000460475 POTEJP0CG39 1038 aa22.18■■□□□ 1.14
PLOD3-209ENST00000460475 LDHDQ86WU2 507 aa22.18■■□□□ 1.14
PLOD3-209ENST00000460475 COPRSQ9NQ92 184 aa22.18■■□□□ 1.14
PLOD3-209ENST00000460475 CIAO1O76071 339 aa22.17■■□□□ 1.14
PLOD3-209ENST00000460475 PDE8BO95263 885 aa22.17■■□□□ 1.14
PLOD3-209ENST00000460475 USP50Q70EL3 339 aaPredicted RBP22.17■■□□□ 1.14
PLOD3-209ENST00000460475 ATG9AQ7Z3C6 839 aa22.17■■□□□ 1.14
PLOD3-209ENST00000460475 ITPRIPQ8IWB1 547 aa22.17■■□□□ 1.14
PLOD3-209ENST00000460475 PANK1Q8TE04 598 aa22.17■■□□□ 1.14
PLOD3-209ENST00000460475 ZBTB12Q9Y330 459 aaPredicted RBP22.17■■□□□ 1.14
PLOD3-209ENST00000460475 ZNF646O15015 1829 aaPredicted RBP22.17■■□□□ 1.14
PLOD3-209ENST00000460475 USP17L3A6NCW0 530 aa22.16■■□□□ 1.14
PLOD3-209ENST00000460475 USP17L4A6NCW7 530 aa22.16■■□□□ 1.14
PLOD3-209ENST00000460475 METTL24Q5JXM2 366 aa22.16■■□□□ 1.14
PLOD3-209ENST00000460475 CHADLQ6NUI6 762 aa22.16■■□□□ 1.14
PLOD3-209ENST00000460475 USP17L1Q7RTZ2 530 aa22.16■■□□□ 1.14
PLOD3-209ENST00000460475 ADARB2Q9NS39 739 aaKnown RBP22.16■■□□□ 1.14
PLOD3-209ENST00000460475 CNOT7Q9UIV1 285 aaKnown RBP22.16■■□□□ 1.14
PLOD3-209ENST00000460475 HSPA6P17066 643 aa22.15■■□□□ 1.14
PLOD3-209ENST00000460475 STRIP1Q5VSL9 837 aa22.15■■□□□ 1.14
PLOD3-209ENST00000460475 RSBN1LQ6PCB5 846 aaPredicted RBP22.15■■□□□ 1.14
PLOD3-209ENST00000460475 AGBL3Q8NEM8 1001 aa22.15■■□□□ 1.14
PLOD3-209ENST00000460475 GMLQ99445 158 aa22.15■■□□□ 1.14
PLOD3-209ENST00000460475 CD209Q9NNX6 404 aa22.15■■□□□ 1.14
PLOD3-209ENST00000460475 CEP350Q5VT06 3117 aa22.14■■□□□ 1.14
PLOD3-209ENST00000460475 SRGAP3O43295 1099 aa22.14■■□□□ 1.13
PLOD3-209ENST00000460475 IL1R1P14778 569 aa22.14■■□□□ 1.13
PLOD3-209ENST00000460475 EAPPQ56P03 285 aaPredicted RBP22.14■■□□□ 1.13
PLOD3-209ENST00000460475 ZNF804AQ7Z570 1209 aa22.14■■□□□ 1.13
PLOD3-209ENST00000460475 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
PLOD3-209ENST00000460475 FGFR2P21802 821 aa22.13■■□□□ 1.13
PLOD3-209ENST00000460475 DACT2Q5SW24 774 aa22.13■■□□□ 1.13
PLOD3-209ENST00000460475 MICALL2Q8IY33 904 aa22.13■■□□□ 1.13
PLOD3-209ENST00000460475 FAM84BQ96KN1 310 aaPredicted RBP22.13■■□□□ 1.13
PLOD3-209ENST00000460475 PA2G4Q9UQ80 394 aaKnown RBP22.13■■□□□ 1.13
PLOD3-209ENST00000460475 H7C1D1 291 aa22.12■■□□□ 1.13
PLOD3-209ENST00000460475 IL15P40933 162 aaPredicted RBP22.12■■□□□ 1.13
PLOD3-209ENST00000460475 PDE3AQ14432 1141 aa22.12■■□□□ 1.13
PLOD3-209ENST00000460475 PNMA6EA0A0J9YXQ4 647 aa22.11■■□□□ 1.13
PLOD3-209ENST00000460475 SHTN1A0MZ66 631 aa22.11■■□□□ 1.13
PLOD3-209ENST00000460475 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
PLOD3-209ENST00000460475 PUM3Q15397 648 aaKnown RBP22.11■■□□□ 1.13
PLOD3-209ENST00000460475 TTLL5Q6EMB2 1281 aa22.11■■□□□ 1.13
PLOD3-209ENST00000460475 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.11■■□□□ 1.13
PLOD3-209ENST00000460475 SIL1Q9H173 461 aa22.11■■□□□ 1.13
PLOD3-209ENST00000460475 PGAP2Q9UHJ9 254 aa22.11■■□□□ 1.13
PLOD3-209ENST00000460475 MYO3BQ8WXR4 1341 aa22.1■■□□□ 1.13
PLOD3-209ENST00000460475 HIRAP54198 1017 aaPredicted RBP22.1■■□□□ 1.13
PLOD3-209ENST00000460475 ZNF280AP59817 542 aaPredicted RBP22.1■■□□□ 1.13
PLOD3-209ENST00000460475 ATP8B2P98198 1209 aa22.1■■□□□ 1.13
PLOD3-209ENST00000460475 FBXO33Q7Z6M2 555 aa22.1■■□□□ 1.13
PLOD3-209ENST00000460475 TDRD7Q8NHU6 1098 aaKnown RBP22.1■■□□□ 1.13
PLOD3-209ENST00000460475 CEP126Q9P2H0 1117 aa22.1■■□□□ 1.13
PLOD3-209ENST00000460475 CLEC11AQ9Y240 323 aa22.1■■□□□ 1.13
PLOD3-209ENST00000460475 SASH1O94885 1247 aa22.09■■□□□ 1.13
PLOD3-209ENST00000460475 ITGBL1O95965 494 aaPredicted RBP22.09■■□□□ 1.13
PLOD3-209ENST00000460475 HIBADHP31937 336 aaKnown RBP22.09■■□□□ 1.13
PLOD3-209ENST00000460475 GYG1P46976 350 aa22.09■■□□□ 1.13
PLOD3-209ENST00000460475 POLA2Q14181 598 aa22.09■■□□□ 1.13
PLOD3-209ENST00000460475 SSH3Q8TE77 659 aa22.09■■□□□ 1.13
PLOD3-209ENST00000460475 ZC3H15Q8WU90 426 aaKnown RBP22.09■■□□□ 1.13
PLOD3-209ENST00000460475 DDX19BQ9UMR2 479 aa22.09■■□□□ 1.13
PLOD3-209ENST00000460475 MMP14P50281 582 aa22.08■■□□□ 1.13
PLOD3-209ENST00000460475 GTF2IP78347 998 aa22.08■■□□□ 1.13
PLOD3-209ENST00000460475 TRPM4Q8TD43 1214 aa22.08■■□□□ 1.13
PLOD3-209ENST00000460475 LPIN2Q92539 896 aa22.08■■□□□ 1.13
PLOD3-209ENST00000460475 FAM205AQ6ZU69 1335 aa22.07■■□□□ 1.12
PLOD3-209ENST00000460475 IFIT1P09914 478 aaKnown RBP22.07■■□□□ 1.12
PLOD3-209ENST00000460475 USP17L8P0C7I0 530 aa22.07■■□□□ 1.12
PLOD3-209ENST00000460475 FKBP1AP62942 108 aaKnown RBP22.07■■□□□ 1.12
PLOD3-209ENST00000460475 SAMD7Q7Z3H4 446 aa22.07■■□□□ 1.12
PLOD3-209ENST00000460475 C1orf115Q9H7X2 142 aa22.07■■□□□ 1.12
PLOD3-209ENST00000460475 COG6Q9Y2V7 657 aa22.07■■□□□ 1.12
PLOD3-209ENST00000460475 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
PLOD3-209ENST00000460475 APLP1P51693 650 aa22.06■■□□□ 1.12
PLOD3-209ENST00000460475 CAVIN4Q5BKX8 364 aa22.06■■□□□ 1.12
PLOD3-209ENST00000460475 MAP1SQ66K74 1059 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-209ENST00000460475 CNTROBQ8N137 903 aa22.06■■□□□ 1.12
PLOD3-209ENST00000460475 MXD3Q9BW11 206 aa22.06■■□□□ 1.12
PLOD3-209ENST00000460475 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
PLOD3-209ENST00000460475 EGFRP00533 1210 aa22.05■■□□□ 1.12
PLOD3-209ENST00000460475 SLC5A1P13866 664 aa22.05■■□□□ 1.12
PLOD3-209ENST00000460475 ATP2B3Q16720 1220 aa22.05■■□□□ 1.12
PLOD3-209ENST00000460475 TBC1D10BQ4KMP7 808 aaPredicted RBP22.05■■□□□ 1.12
PLOD3-209ENST00000460475 C20orf194Q5TEA3 1177 aa22.05■■□□□ 1.12
PLOD3-209ENST00000460475 CHMP4BQ9H444 224 aaKnown RBP22.05■■□□□ 1.12
PLOD3-209ENST00000460475 POLR2AP24928 1970 aaKnown RBP22.05■■□□□ 1.12
PLOD3-209ENST00000460475 CEP85Q6P2H3 762 aa22.04■■□□□ 1.12
PLOD3-209ENST00000460475 CERS5Q8N5B7 392 aa22.04■■□□□ 1.12
PLOD3-209ENST00000460475 FBXW7Q969H0 707 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms