RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 EYA3Q99504 573 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 DBNLQ9UJU6 430 aaKnown RBP13.11□□□□□ -0.31
CDHR4-203ENST00000460430 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
CDHR4-203ENST00000460430 MED23Q9ULK4 1368 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 FGFR2P21802 821 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 PDE4AP27815 886 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 ADORA1P30542 326 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 CAVIN4Q5BKX8 364 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 SKAP1Q86WV1 359 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
CDHR4-203ENST00000460430 OTUD7AQ8TE49 926 aaPredicted RBP13.1□□□□□ -0.31
CDHR4-203ENST00000460430 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
CDHR4-203ENST00000460430 TSHZ3Q63HK5 1081 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
CDHR4-203ENST00000460430 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 POLLQ9UGP5 575 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 TTC41PQ6P2S7 1318 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
CDHR4-203ENST00000460430 SNED1Q8TER0 1413 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 G3V3G9 751 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 ERC2O15083 957 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 KLRK1P26718 216 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 GYG1P46976 350 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 PSMD1Q99460 953 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 ZC3H12CQ9C0D7 883 aaKnown RBP13.08□□□□□ -0.32
CDHR4-203ENST00000460430 GNL3LQ9NVN8 582 aaKnown RBP13.08□□□□□ -0.32
CDHR4-203ENST00000460430 AOX1Q06278 1338 aa13.08□□□□□ -0.32
CDHR4-203ENST00000460430 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
CDHR4-203ENST00000460430 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
CDHR4-203ENST00000460430 FRAT2O75474 233 aaPredicted RBP13.07□□□□□ -0.32
CDHR4-203ENST00000460430 PDE1AP54750 535 aa13.07□□□□□ -0.32
CDHR4-203ENST00000460430 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDHR4-203ENST00000460430 WASHC4Q2M389 1173 aa13.07□□□□□ -0.32
CDHR4-203ENST00000460430 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
CDHR4-203ENST00000460430 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
CDHR4-203ENST00000460430 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
CDHR4-203ENST00000460430 SRCAPQ6ZRS2 3230 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
CDHR4-203ENST00000460430 UQCRFS1P1P0C7P4 283 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 HIBADHP31937 336 aaKnown RBP13.06□□□□□ -0.32
CDHR4-203ENST00000460430 PHKA1P46020 1223 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 BCAMP50895 628 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 GPR162Q16538 588 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
CDHR4-203ENST00000460430 C15orf52Q6ZUT6 534 aaKnown RBP13.06□□□□□ -0.32
CDHR4-203ENST00000460430 RASSF7Q02833 373 aa13.05□□□□□ -0.32
CDHR4-203ENST00000460430 AOC3Q16853 763 aa13.05□□□□□ -0.32
CDHR4-203ENST00000460430 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
CDHR4-203ENST00000460430 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
CDHR4-203ENST00000460430 STAP2Q9UGK3 403 aa13.05□□□□□ -0.32
CDHR4-203ENST00000460430 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
CDHR4-203ENST00000460430 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDHR4-203ENST00000460430 ATP5JP18859 108 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
CDHR4-203ENST00000460430 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
CDHR4-203ENST00000460430 KIAA2012Q0VF49 1180 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 ARHGAP27Q6ZUM4 889 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 FAM84BQ96KN1 310 aaPredicted RBP13.04□□□□□ -0.32
CDHR4-203ENST00000460430 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
CDHR4-203ENST00000460430 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
CDHR4-203ENST00000460430 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 NFKBIEO00221 500 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 SEMA3EO15041 775 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
CDHR4-203ENST00000460430 RASGRF1Q13972 1273 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 FBXO33Q7Z6M2 555 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDHR4-203ENST00000460430 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 DENND2AQ9ULE3 1009 aa13.03□□□□□ -0.32
CDHR4-203ENST00000460430 ECE2O60344 883 aa13.02□□□□□ -0.33
CDHR4-203ENST00000460430 MCAMP43121 646 aa13.02□□□□□ -0.33
CDHR4-203ENST00000460430 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
CDHR4-203ENST00000460430 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.33
CDHR4-203ENST00000460430 HAUS7Q99871 368 aa13.02□□□□□ -0.33
CDHR4-203ENST00000460430 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
CDHR4-203ENST00000460430 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
CDHR4-203ENST00000460430 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
CDHR4-203ENST00000460430 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CDHR4-203ENST00000460430 SCARF1Q14162 830 aa13.01□□□□□ -0.33
CDHR4-203ENST00000460430 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms