RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 ZFYVE1Q9HBF4 777 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 KLF15Q9UIH9 416 aa8.73□□□□□ -1.01
CCDC50-203ENST00000460064 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 ARAFP10398 606 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 ADH6P28332 368 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 MAP2K3P46734 347 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 GRIA4P48058 902 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 ATP11AP98196 1134 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 SPRED3Q2MJR0 410 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 CEP135Q66GS9 1140 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 TNFRSF25Q93038 417 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 C8orf37Q96NL8 207 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 MBIPQ9NS73 344 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
CCDC50-203ENST00000460064 A0A096LPE4 126 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 H3BM21 787 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 SMNDC1O75940 238 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC50-203ENST00000460064 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
CCDC50-203ENST00000460064 NAALADL2Q58DX5 795 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 ELMSAN1Q6PJG2 1045 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 POP1Q99575 1024 aaKnown RBP8.71□□□□□ -1.02
CCDC50-203ENST00000460064 TGIF2Q9GZN2 237 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 SLC6A14Q9UN76 642 aa8.71□□□□□ -1.02
CCDC50-203ENST00000460064 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
CCDC50-203ENST00000460064 ADH7P40394 386 aa8.7□□□□□ -1.02
CCDC50-203ENST00000460064 ZNF394Q53GI3 561 aa8.7□□□□□ -1.02
CCDC50-203ENST00000460064 USP48Q86UV5 1035 aa8.7□□□□□ -1.02
CCDC50-203ENST00000460064 PLD4Q96BZ4 506 aa8.7□□□□□ -1.02
CCDC50-203ENST00000460064 BHLHE41Q9C0J9 482 aaPredicted RBP8.7□□□□□ -1.02
CCDC50-203ENST00000460064 CCSER2Q9H7U1 834 aa8.7□□□□□ -1.02
CCDC50-203ENST00000460064 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 IGSF3O75054 1194 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 ALAS2P22557 587 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 CCDC85BQ15834 202 aaPredicted RBP8.69□□□□□ -1.02
CCDC50-203ENST00000460064 PERM1Q5SV97 790 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 SLC16A10Q8TF71 515 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 NOC4LQ9BVI4 516 aaKnown RBP8.69□□□□□ -1.02
CCDC50-203ENST00000460064 COL25A1Q9BXS0 654 aaPredicted RBP8.69□□□□□ -1.02
CCDC50-203ENST00000460064 SMG9Q9H0W8 520 aaKnown RBP8.69□□□□□ -1.02
CCDC50-203ENST00000460064 DDX41Q9UJV9 622 aaKnown RBP8.69□□□□□ -1.02
CCDC50-203ENST00000460064 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 PPM1HQ9ULR3 514 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 PCDHGB7Q9Y5F8 929 aa8.69□□□□□ -1.02
CCDC50-203ENST00000460064 FBXO24O75426 580 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 ITPKAP23677 461 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 RACK1P63244 317 aaKnown RBP8.68□□□□□ -1.02
CCDC50-203ENST00000460064 TPTE2Q6XPS3 522 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 RELL1Q8IUW5 271 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 ZNF654Q8IZM8 581 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 ACBD3Q9H3P7 528 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 IGF1RP08069 1367 aa8.68□□□□□ -1.02
CCDC50-203ENST00000460064 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
CCDC50-203ENST00000460064 ELOA3DA6NLF2 546 aaPredicted RBP8.67□□□□□ -1.02
CCDC50-203ENST00000460064 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
CCDC50-203ENST00000460064 ELOA3BQ3SY89 546 aa8.67□□□□□ -1.02
CCDC50-203ENST00000460064 ELOA3Q8NG57 546 aa8.67□□□□□ -1.02
CCDC50-203ENST00000460064 BSNDQ8WZ55 320 aa8.67□□□□□ -1.02
CCDC50-203ENST00000460064 CEP44Q9C0F1 390 aa8.67□□□□□ -1.02
CCDC50-203ENST00000460064 SRA1Q9HD15 236 aaKnown RBP8.67□□□□□ -1.02
CCDC50-203ENST00000460064 COPRSQ9NQ92 184 aa8.67□□□□□ -1.02
CCDC50-203ENST00000460064 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 PSAPL1Q6NUJ1 521 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 SV2BQ7L1I2 683 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 RSRP1Q9BUV0 290 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 LACRTQ9GZZ8 138 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 MUC3BQ9H195 1237 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
CCDC50-203ENST00000460064 FAM177BA6PVY3 158 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 PTPRAP18433 802 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 TNNI2P48788 182 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 ZNF157P51786 506 aaPredicted RBP8.65□□□□□ -1.02
CCDC50-203ENST00000460064 MAP3K11Q16584 847 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 ERMP1Q7Z2K6 904 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 NUDT8Q8WV74 236 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 LPIN3Q9BQK8 851 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 TRIM56Q9BRZ2 755 aaKnown RBP8.65□□□□□ -1.02
CCDC50-203ENST00000460064 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 SEC31BQ9NQW1 1179 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 KBTBD4Q9NVX7 518 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 FRRS1LQ9P0K9 344 aa8.65□□□□□ -1.02
CCDC50-203ENST00000460064 GDF2Q9UK05 429 aaPredicted RBP8.65□□□□□ -1.02
CCDC50-203ENST00000460064 F6X3S4 739 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 RGS9O75916 674 aaPredicted RBP8.64□□□□□ -1.03
CCDC50-203ENST00000460064 VSIG8P0DPA2 414 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 RLBP1P12271 317 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 GBP2P32456 591 aaPredicted RBP8.64□□□□□ -1.03
CCDC50-203ENST00000460064 MAP3K10Q02779 954 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 SRSF11Q05519 484 aaKnown RBP8.64□□□□□ -1.03
CCDC50-203ENST00000460064 PWP1Q13610 501 aa8.64□□□□□ -1.03
CCDC50-203ENST00000460064 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms