RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	CXCL9	Q07325	125 aa		32.03	■■■□□ 2.72
SEMA3C-205	ENST00000458729	TNIP1	Q15025	636 aa		32.03	■■■□□ 2.72
SEMA3C-205	ENST00000458729	PUM3	Q15397	648 aa	Known RBP	32.03	■■■□□ 2.72
SEMA3C-205	ENST00000458729	CIAPIN1	Q6FI81	312 aa		32.03	■■■□□ 2.72
SEMA3C-205	ENST00000458729	IRS2	Q9Y4H2	1338 aa		32.03	■■■□□ 2.72
SEMA3C-205	ENST00000458729	HMMR	O75330	724 aa		32.02	■■■□□ 2.72
SEMA3C-205	ENST00000458729	KLRK1	P26718	216 aa		32.02	■■■□□ 2.72
SEMA3C-205	ENST00000458729	CRBN	Q96SW2	442 aa		32.01	■■■□□ 2.72
SEMA3C-205	ENST00000458729	SURF6	O75683	361 aa	Known RBP	32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	ZNF804A	Q7Z570	1209 aa		32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	NOP58	Q9Y2X3	529 aa	Known RBP	32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	GJA3	Q9Y6H8	435 aa		32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	RAD17	O75943	681 aa		32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	IFIT1	P09914	478 aa	Known RBP	32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	FGFR2	P21802	821 aa		32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	LPIN2	Q92539	896 aa		32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32	■■■□□ 2.71
SEMA3C-205	ENST00000458729	SLC5A1	P13866	664 aa		31.98	■■■□□ 2.71
SEMA3C-205	ENST00000458729	OS9	Q13438	667 aa	Predicted RBP	31.98	■■■□□ 2.71
SEMA3C-205	ENST00000458729	CD209	Q9NNX6	404 aa		31.98	■■■□□ 2.71
SEMA3C-205	ENST00000458729	ATP2B3	Q16720	1220 aa		31.97	■■■□□ 2.71
SEMA3C-205	ENST00000458729	CAVIN4	Q5BKX8	364 aa		31.97	■■■□□ 2.71
SEMA3C-205	ENST00000458729	SIRT2	Q8IXJ6	389 aa		31.97	■■■□□ 2.71
SEMA3C-205	ENST00000458729	RRAGC	Q9HB90	399 aa		31.97	■■■□□ 2.71
SEMA3C-205	ENST00000458729	NMRK2	Q9NPI5	230 aa		31.97	■■■□□ 2.71
SEMA3C-205	ENST00000458729	AKAP2	Q9Y2D5	859 aa		31.97	■■■□□ 2.71
SEMA3C-205	ENST00000458729	WDR90	Q96KV7	1748 aa		31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	VEGFA	P15692	232 aa	Predicted RBP	31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	HIBADH	P31937	336 aa	Known RBP	31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	TFCP2	Q12800	502 aa		31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	AAMP	Q13685	434 aa		31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	FAM84B	Q96KN1	310 aa	Predicted RBP	31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	KCNQ5	Q9NR82	932 aa		31.96	■■■□□ 2.71
SEMA3C-205	ENST00000458729	PSMD14	O00487	310 aa		31.95	■■■□□ 2.7
SEMA3C-205	ENST00000458729	HSP90AB4P	Q58FF6	505 aa		31.95	■■■□□ 2.7
SEMA3C-205	ENST00000458729	IQCA1L	A6NCM1	817 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	USP17L3	A6NCW0	530 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	USP17L4	A6NCW7	530 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	IL1R1	P14778	569 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	GYG1	P46976	350 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	USP17L1	Q7RTZ2	530 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	VPS37D	Q86XT2	251 aa		31.94	■■■□□ 2.7
SEMA3C-205	ENST00000458729	SASH1	O94885	1247 aa		31.93	■■■□□ 2.7
SEMA3C-205	ENST00000458729	VIL1	P09327	827 aa	Known RBP	31.93	■■■□□ 2.7
SEMA3C-205	ENST00000458729	FBXO33	Q7Z6M2	555 aa		31.93	■■■□□ 2.7
SEMA3C-205	ENST00000458729	POTEC	B2RU33	542 aa		31.92	■■■□□ 2.7
SEMA3C-205	ENST00000458729	ERC1	Q8IUD2	1116 aa		31.92	■■■□□ 2.7
SEMA3C-205	ENST00000458729	RPS12	P25398	132 aa	Known RBP	31.91	■■■□□ 2.7
SEMA3C-205	ENST00000458729	LMOD1	P29536	600 aa	Predicted RBP	31.91	■■■□□ 2.7
SEMA3C-205	ENST00000458729	STRIP1	Q5VSL9	837 aa		31.91	■■■□□ 2.7
SEMA3C-205	ENST00000458729	SCN9A	Q15858	1988 aa		31.91	■■■□□ 2.7
SEMA3C-205	ENST00000458729	TDRD7	Q8NHU6	1098 aa	Known RBP	31.9	■■■□□ 2.7
SEMA3C-205	ENST00000458729	GPR108	Q9NPR9	543 aa		31.9	■■■□□ 2.7
SEMA3C-205	ENST00000458729	HACL1	Q9UJ83	578 aa		31.9	■■■□□ 2.7
SEMA3C-205	ENST00000458729	KIF3C	O14782	793 aa		31.89	■■■□□ 2.7
SEMA3C-205	ENST00000458729	GMPS	P49915	693 aa	Predicted RBP	31.89	■■■□□ 2.7
SEMA3C-205	ENST00000458729	TTLL5	Q6EMB2	1281 aa		31.89	■■■□□ 2.7
SEMA3C-205	ENST00000458729	DPF2	Q92785	391 aa		31.89	■■■□□ 2.7
SEMA3C-205	ENST00000458729	EXOC6B	Q9Y2D4	811 aa		31.89	■■■□□ 2.7
SEMA3C-205	ENST00000458729		A0A1B0GUL7	405 aa		31.88	■■■□□ 2.69
SEMA3C-205	ENST00000458729	BCAM	P50895	628 aa		31.88	■■■□□ 2.69
SEMA3C-205	ENST00000458729	SCNN1D	P51172	638 aa		31.88	■■■□□ 2.69
SEMA3C-205	ENST00000458729	TIMM10	P62072	90 aa		31.88	■■■□□ 2.69
SEMA3C-205	ENST00000458729	RSBN1L	Q6PCB5	846 aa	Predicted RBP	31.88	■■■□□ 2.69
SEMA3C-205	ENST00000458729	SCN4A	P35499	1836 aa		31.88	■■■□□ 2.69
SEMA3C-205	ENST00000458729	GTF2I	P78347	998 aa		31.87	■■■□□ 2.69
SEMA3C-205	ENST00000458729	AGBL3	Q8NEM8	1001 aa		31.87	■■■□□ 2.69
SEMA3C-205	ENST00000458729	FBXW7	Q969H0	707 aa		31.87	■■■□□ 2.69
SEMA3C-205	ENST00000458729	GPRC5D	Q9NZD1	345 aa		31.87	■■■□□ 2.69
SEMA3C-205	ENST00000458729	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.87	■■■□□ 2.69
SEMA3C-205	ENST00000458729	DACT2	Q5SW24	774 aa		31.86	■■■□□ 2.69
SEMA3C-205	ENST00000458729	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.86	■■■□□ 2.69
SEMA3C-205	ENST00000458729	PCDHB15	Q9Y5E8	787 aa		31.86	■■■□□ 2.69
SEMA3C-205	ENST00000458729	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	31.86	■■■□□ 2.69
SEMA3C-205	ENST00000458729	PSME4	Q14997	1843 aa		31.86	■■■□□ 2.69
SEMA3C-205	ENST00000458729	MYO3B	Q8WXR4	1341 aa		31.85	■■■□□ 2.69
SEMA3C-205	ENST00000458729	RAB11FIP3	O75154	756 aa		31.85	■■■□□ 2.69
SEMA3C-205	ENST00000458729	NEUROD6	Q96NK8	337 aa		31.85	■■■□□ 2.69
SEMA3C-205	ENST00000458729	TAF1D	Q9H5J8	278 aa	Predicted RBP	31.85	■■■□□ 2.69
SEMA3C-205	ENST00000458729	ZNF609	O15014	1411 aa		31.85	■■■□□ 2.69
SEMA3C-205	ENST00000458729	FRAT2	O75474	233 aa	Predicted RBP	31.84	■■■□□ 2.69
SEMA3C-205	ENST00000458729	EXOC6	Q8TAG9	804 aa		31.84	■■■□□ 2.69
SEMA3C-205	ENST00000458729	GNL3L	Q9NVN8	582 aa	Known RBP	31.84	■■■□□ 2.69
SEMA3C-205	ENST00000458729	FAM205A	Q6ZU69	1335 aa		31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	EPHX2	P34913	555 aa		31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	EPS15	P42566	896 aa		31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	TNNI3K	Q59H18	835 aa		31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	XAGE2	Q96GT9	111 aa		31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	CNOT7	Q9UIV1	285 aa	Known RBP	31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	FPGT-TNNI3K	V9GXZ4	949 aa		31.83	■■■□□ 2.69
SEMA3C-205	ENST00000458729	FKBP1A	P62942	108 aa	Known RBP	31.82	■■■□□ 2.68
SEMA3C-205	ENST00000458729	RHPN1	Q8TCX5	695 aa		31.82	■■■□□ 2.68
SEMA3C-205	ENST00000458729	KIF1BP	Q96EK5	621 aa		31.82	■■■□□ 2.68
SEMA3C-205	ENST00000458729	GML	Q99445	158 aa		31.82	■■■□□ 2.68
SEMA3C-205	ENST00000458729		H7C1D1	291 aa		31.81	■■■□□ 2.68
SEMA3C-205	ENST00000458729	ADORA1	P30542	326 aa		31.81	■■■□□ 2.68
SEMA3C-205	ENST00000458729	PNMA8A	Q86V59	439 aa	Predicted RBP	31.81	■■■□□ 2.68
SEMA3C-205	ENST00000458729	ZBTB22	O15209	634 aa		31.8	■■■□□ 2.68
SEMA3C-205	ENST00000458729	CCDC102B	Q68D86	513 aa		31.8	■■■□□ 2.68
SEMA3C-205	ENST00000458729	MICALL2	Q8IY33	904 aa		31.8	■■■□□ 2.68

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