RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RASAL3Q86YV0 1011 aa20.13■□□□□ 0.81
CHCHD3-204ENST00000457942 NEURL1BA8MQ27 555 aa20.12■□□□□ 0.81
CHCHD3-204ENST00000457942 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
CHCHD3-204ENST00000457942 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
CHCHD3-204ENST00000457942 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
CHCHD3-204ENST00000457942 CDC5LQ99459 802 aaKnown RBP20.12■□□□□ 0.81
CHCHD3-204ENST00000457942 HPS5Q9UPZ3 1129 aa20.12■□□□□ 0.81
CHCHD3-204ENST00000457942 PRPF38BQ5VTL8 546 aaKnown RBP20.11■□□□□ 0.81
CHCHD3-204ENST00000457942 MOB2Q70IA6 237 aa20.11■□□□□ 0.81
CHCHD3-204ENST00000457942 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
CHCHD3-204ENST00000457942 XDHP47989 1333 aa20.1■□□□□ 0.81
CHCHD3-204ENST00000457942 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
CHCHD3-204ENST00000457942 PAPPA2Q9BXP8 1791 aa20.1■□□□□ 0.81
CHCHD3-204ENST00000457942 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
CHCHD3-204ENST00000457942 MYH16Q9H6N6 1097 aa20.09■□□□□ 0.81
CHCHD3-204ENST00000457942 GREM2Q9H772 168 aa20.09■□□□□ 0.81
CHCHD3-204ENST00000457942 TBC1D8O95759 1140 aa20.08■□□□□ 0.81
CHCHD3-204ENST00000457942 MKRN3Q13064 507 aaKnown RBP20.08■□□□□ 0.81
CHCHD3-204ENST00000457942 SCARF1Q14162 830 aa20.08■□□□□ 0.81
CHCHD3-204ENST00000457942 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.81
CHCHD3-204ENST00000457942 HDAC9Q9UKV0 1011 aa20.08■□□□□ 0.81
CHCHD3-204ENST00000457942 PRAMEF18Q5VWM3 479 aa20.07■□□□□ 0.8
CHCHD3-204ENST00000457942 VAMP4O75379 141 aa20.06■□□□□ 0.8
CHCHD3-204ENST00000457942 ATP2B4P23634 1241 aa20.06■□□□□ 0.8
CHCHD3-204ENST00000457942 IGHMBP2P38935 993 aaKnown RBP20.06■□□□□ 0.8
CHCHD3-204ENST00000457942 GCKRQ14397 625 aa20.06■□□□□ 0.8
CHCHD3-204ENST00000457942 H7C1W4 665 aa20.05■□□□□ 0.8
CHCHD3-204ENST00000457942 VIL1P09327 827 aaKnown RBP20.05■□□□□ 0.8
CHCHD3-204ENST00000457942 ZNF296Q8WUU4 475 aaPredicted RBP20.05■□□□□ 0.8
CHCHD3-204ENST00000457942 PSME4Q14997 1843 aa20.04■□□□□ 0.8
CHCHD3-204ENST00000457942 UBE2Q2LH0YL09 131 aa20.04■□□□□ 0.8
CHCHD3-204ENST00000457942 TTLL12Q14166 644 aaPredicted RBP20.04■□□□□ 0.8
CHCHD3-204ENST00000457942 RSBN1LQ6PCB5 846 aaPredicted RBP20.04■□□□□ 0.8
CHCHD3-204ENST00000457942 LINS1Q8NG48 757 aa20.04■□□□□ 0.8
CHCHD3-204ENST00000457942 BSDC1Q9NW68 430 aaPredicted RBP20.04■□□□□ 0.8
CHCHD3-204ENST00000457942 MYOZ2Q9NPC6 264 aa20.03■□□□□ 0.8
CHCHD3-204ENST00000457942 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
CHCHD3-204ENST00000457942 MINPP1Q9UNW1 487 aa20.03■□□□□ 0.8
CHCHD3-204ENST00000457942 ITGA6P23229 1130 aa20.02■□□□□ 0.8
CHCHD3-204ENST00000457942 ZNF280AP59817 542 aaPredicted RBP20.02■□□□□ 0.8
CHCHD3-204ENST00000457942 FBXW7Q969H0 707 aa20.02■□□□□ 0.8
CHCHD3-204ENST00000457942 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
CHCHD3-204ENST00000457942 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.02■□□□□ 0.8
CHCHD3-204ENST00000457942 CHMP3Q9Y3E7 222 aa20.02■□□□□ 0.8
CHCHD3-204ENST00000457942 MED23Q9ULK4 1368 aa20.01■□□□□ 0.79
CHCHD3-204ENST00000457942 F6X3S4 739 aa20.01■□□□□ 0.79
CHCHD3-204ENST00000457942 CCT4P50991 539 aaKnown RBP20.01■□□□□ 0.79
CHCHD3-204ENST00000457942 PLA2G12BQ9BX93 195 aa20.01■□□□□ 0.79
CHCHD3-204ENST00000457942 KCNJ4P48050 445 aa20■□□□□ 0.79
CHCHD3-204ENST00000457942 PRKG1Q13976 671 aa20■□□□□ 0.79
CHCHD3-204ENST00000457942 MXD3Q9BW11 206 aa20■□□□□ 0.79
CHCHD3-204ENST00000457942 USP17L3A6NCW0 530 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 USP17L4A6NCW7 530 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 USP17L8P0C7I0 530 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 NBPF9Q3BBW0 867 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 USP17L1Q7RTZ2 530 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 PODNQ7Z5L7 613 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 AGBL3Q8NEM8 1001 aa19.99■□□□□ 0.79
CHCHD3-204ENST00000457942 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 CASP7P55210 303 aa19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 FKBP1BP68106 108 aa19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 REM2Q8IYK8 340 aaPredicted RBP19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 ANKRD2Q9GZV1 360 aa19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 ZNF609O15014 1411 aa19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 HTTP42858 3142 aa19.98■□□□□ 0.79
CHCHD3-204ENST00000457942 WTIPA6NIX2 430 aaPredicted RBP19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 GPR25O00155 361 aa19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 SLC4A10Q6U841 1118 aa19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 LEMD3Q9Y2U8 911 aa19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 ZNF804BA4D1E1 1349 aa19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 PITPNM2Q9BZ72 1349 aa19.97■□□□□ 0.79
CHCHD3-204ENST00000457942 SASH1O94885 1247 aa19.96■□□□□ 0.79
CHCHD3-204ENST00000457942 IFIT5Q13325 482 aaKnown RBP19.96■□□□□ 0.79
CHCHD3-204ENST00000457942 PKN2Q16513 984 aaKnown RBP19.96■□□□□ 0.79
CHCHD3-204ENST00000457942 GMLQ99445 158 aa19.96■□□□□ 0.79
CHCHD3-204ENST00000457942 R3HDMLQ9H3Y0 253 aa19.96■□□□□ 0.79
CHCHD3-204ENST00000457942 C9orf78Q9NZ63 289 aaPredicted RBP19.96■□□□□ 0.79
CHCHD3-204ENST00000457942 CSF1RP07333 972 aa19.95■□□□□ 0.78
CHCHD3-204ENST00000457942 TAF7LQ5H9L4 462 aa19.95■□□□□ 0.78
CHCHD3-204ENST00000457942 FBXO46Q6PJ61 603 aaPredicted RBP19.95■□□□□ 0.78
CHCHD3-204ENST00000457942 COA1Q9GZY4 146 aa19.95■□□□□ 0.78
CHCHD3-204ENST00000457942 FZD1Q9UP38 647 aa19.95■□□□□ 0.78
CHCHD3-204ENST00000457942 ZNF646O15015 1829 aaPredicted RBP19.95■□□□□ 0.78
CHCHD3-204ENST00000457942 GRM8O00222 908 aa19.94■□□□□ 0.78
CHCHD3-204ENST00000457942 CHRNDQ07001 517 aa19.94■□□□□ 0.78
CHCHD3-204ENST00000457942 OGFOD1Q8N543 542 aa19.93■□□□□ 0.78
CHCHD3-204ENST00000457942 SRCIN1Q9C0H9 1055 aa19.93■□□□□ 0.78
CHCHD3-204ENST00000457942 A0A1B0GUL6 1792 aa19.93■□□□□ 0.78
CHCHD3-204ENST00000457942 MKI67P46013 3256 aaKnown RBP19.93■□□□□ 0.78
CHCHD3-204ENST00000457942 FKTNO75072 461 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 KLRK1P26718 216 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 NF2P35240 595 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 FOXO4P98177 505 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 SREBF2Q12772 1141 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 CCDC57Q2TAC2 916 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 LMBR1LQ6UX01 489 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 TXNRD3Q86VQ6 643 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 MYO3BQ8WXR4 1341 aa19.92■□□□□ 0.78
CHCHD3-204ENST00000457942 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms