RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CCDC158Q5M9N0 1113 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TTC39AQ5SRH9 613 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TAF3Q5VWG9 929 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 OLFM4Q6UX06 510 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 DDX46Q7L014 1031 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 UBE3BQ7Z3V4 1068 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 KRT28Q7Z3Y7 464 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 RALYLQ86SE5 291 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF589Q86UQ0 364 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 CREBRFQ8IUR6 639 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 NSUN7Q8NE18 718 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF397Q8NF99 534 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 KIF18AQ8NI77 898 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ANKRD7Q92527 254 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF592Q92610 1267 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ERO1AQ96HE7 468 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 C8orf76Q96K31 380 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 TCEANC2Q96MN5 208 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 BPIFA3Q9BQP9 254 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 DBNDD2Q9BQY9 259 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 NOL10Q9BSC4 688 aaKnown RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ARGLU1Q9NWB6 273 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 CWC25Q9NXE8 425 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 OGFRQ9NZT2 677 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 FBXO3Q9UK99 471 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 RCOR1Q9UKL0 485 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ARFGEF2Q9Y6D5 1785 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 ERBB3P21860 1342 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 WDR19Q8NEZ3 1342 aa3.88□□□□□ -1.79
HMGN1P18-201ENST00000457642 MST1RQ04912 1400 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PARP4Q9UKK3 1724 aaKnown RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PSDA5PKW4 1024 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC69A6NI79 296 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 GOLGA8BA8MQT2 603 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 E7EWF7 191 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 EYA2O00167 538 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 SPTLC2O15270 562 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 SLU7O95391 586 aaKnown RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 SLC3A2P08195 630 aaKnown RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CYP21A2P08686 494 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 TPM1P09493 284 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 SKILP12757 684 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 RFX5P48382 616 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 FOSBP53539 338 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 NLRP12P59046 1061 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 FAM193AP78312 1265 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 RBM6P78332 1123 aaKnown RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CBX1P83916 185 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CEBPZQ03701 1054 aaKnown RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 APOBRQ0VD83 1088 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 SLC39A6Q13433 755 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 SNW1Q13573 536 aaKnown RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PDIA6Q15084 440 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 TTF1Q15361 905 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 WASHC4Q2M389 1173 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC57Q2TAC2 916 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZMYM1Q5SVZ6 1142 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 ADALQ6DHV7 355 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 FAM173BQ6P4H8 233 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 LMBR1LQ6UX01 489 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC129Q6ZRS4 1044 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 FILIP1Q7Z7B0 1213 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PROSER2Q86WR7 435 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 LRRC8AQ8IWT6 810 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 KRT222Q8N1A0 295 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF710Q8N1W2 664 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 FBXL16Q8N461 479 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 AOPEPQ8N6M6 819 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC191Q8NCU4 936 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 NCOA7Q8NI08 942 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 KLHDC4Q8TBB5 520 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 WASF1Q92558 559 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 KAZALD1Q96I82 304 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF496Q96IT1 587 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PGBD1Q96JS3 809 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 ATG3Q9NT62 314 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 POLR3EQ9NVU0 708 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 RTEL1Q9NZ71 1219 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CEP126Q9P2H0 1117 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 DACH1Q9UI36 760 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PCDH11XQ9BZA7 1347 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PCDH11YQ9BZA8 1340 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 CARMIL3Q8ND23 1372 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 PKD1L3Q7Z443 1732 aa3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 KDM6AO15550 1401 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P18-201ENST00000457642 C1orf167Q5SNV9 1468 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 KLF18A0A0U1RQI7 1052 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC66A2RUB6 948 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 PRAMEF22A3QJZ6 481 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 GOLGA6L9A6NEM1 432 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 ATP5J2-PTCD1G3V325 749 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 H7C1W4 665 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 IKBKBO14920 756 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 AP5Z1O43299 807 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZSCAN12O43309 604 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 PRC1O43663 620 aa3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 PTCD1O75127 700 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 HSPD1P10809 573 aaKnown RBP3.86□□□□□ -1.79
HMGN1P18-201ENST00000457642 ATF3P18847 181 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms