RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 TXNRD3Q86VQ6 643 aa10.6□□□□□ -0.71
SP140-207ENST00000456542 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
SP140-207ENST00000456542 HELBQ8NG08 1087 aaPredicted RBP10.6□□□□□ -0.71
SP140-207ENST00000456542 KLHDC4Q8TBB5 520 aa10.6□□□□□ -0.71
SP140-207ENST00000456542 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
SP140-207ENST00000456542 PANK1Q8TE04 598 aa10.6□□□□□ -0.71
SP140-207ENST00000456542 COPRSQ9NQ92 184 aa10.6□□□□□ -0.71
SP140-207ENST00000456542 DDX19BQ9UMR2 479 aa10.6□□□□□ -0.71
SP140-207ENST00000456542 GJA3Q9Y6H8 435 aa10.6□□□□□ -0.71
SP140-207ENST00000456542 PSMD14O00487 310 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 SRGAP3O43295 1099 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 RAD17O75943 681 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 PDE8BO95263 885 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 RPS12P25398 132 aaKnown RBP10.59□□□□□ -0.71
SP140-207ENST00000456542 KLRK1P26718 216 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 LMOD1P29536 600 aaPredicted RBP10.59□□□□□ -0.71
SP140-207ENST00000456542 SCNN1DP51172 638 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 C1QTNF8P60827 252 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
SP140-207ENST00000456542 METTL24Q5JXM2 366 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 VGLL2Q8N8G2 317 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 DPF2Q92785 391 aa10.59□□□□□ -0.71
SP140-207ENST00000456542 CHMP4BQ9H444 224 aaKnown RBP10.59□□□□□ -0.71
SP140-207ENST00000456542 TAF1DQ9H5J8 278 aaPredicted RBP10.59□□□□□ -0.71
SP140-207ENST00000456542 SNAP23O00161 211 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 PLIN1O60240 522 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 VIL1P09327 827 aaKnown RBP10.58□□□□□ -0.72
SP140-207ENST00000456542 EPHX2P34913 555 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 IL15P40933 162 aaPredicted RBP10.58□□□□□ -0.72
SP140-207ENST00000456542 GMPSP49915 693 aaPredicted RBP10.58□□□□□ -0.72
SP140-207ENST00000456542 ATG9AQ7Z3C6 839 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 PNMA8AQ86V59 439 aaPredicted RBP10.58□□□□□ -0.72
SP140-207ENST00000456542 GPRC5DQ9NZD1 345 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 ARAP2Q8WZ64 1704 aa10.58□□□□□ -0.72
SP140-207ENST00000456542 PNMA6EA0A0J9YXQ4 647 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 FSTL1Q12841 308 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 PUM3Q15397 648 aaKnown RBP10.57□□□□□ -0.72
SP140-207ENST00000456542 STRIP1Q5VSL9 837 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 SMC1BQ8NDV3 1235 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 AGBL3Q8NEM8 1001 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 SIL1Q9H173 461 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 CD209Q9NNX6 404 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 KCNQ5Q9NR82 932 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 PA2G4Q9UQ80 394 aaKnown RBP10.57□□□□□ -0.72
SP140-207ENST00000456542 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 MYO3BQ8WXR4 1341 aa10.57□□□□□ -0.72
SP140-207ENST00000456542 IL1R1P14778 569 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 FGFR2P21802 821 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 EPS15P42566 896 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 POLA2Q14181 598 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
SP140-207ENST00000456542 USP50Q70EL3 339 aaPredicted RBP10.56□□□□□ -0.72
SP140-207ENST00000456542 LDHDQ86WU2 507 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 LPIN2Q92539 896 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 ADARB2Q9NS39 739 aaKnown RBP10.56□□□□□ -0.72
SP140-207ENST00000456542 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
SP140-207ENST00000456542 IFIT1P09914 478 aaKnown RBP10.55□□□□□ -0.72
SP140-207ENST00000456542 HIBADHP31937 336 aaKnown RBP10.55□□□□□ -0.72
SP140-207ENST00000456542 DACT2Q5SW24 774 aa10.55□□□□□ -0.72
SP140-207ENST00000456542 C20orf194Q5TEA3 1177 aa10.55□□□□□ -0.72
SP140-207ENST00000456542 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
SP140-207ENST00000456542 FAM84BQ96KN1 310 aaPredicted RBP10.55□□□□□ -0.72
SP140-207ENST00000456542 GMLQ99445 158 aa10.55□□□□□ -0.72
SP140-207ENST00000456542 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
SP140-207ENST00000456542 ZBTB40Q9NUA8 1239 aa10.55□□□□□ -0.72
SP140-207ENST00000456542 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
SP140-207ENST00000456542 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
SP140-207ENST00000456542 H7C1D1 291 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 SASH1O94885 1247 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 SLC5A1P13866 664 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 GYG1P46976 350 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 MMP14P50281 582 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 RRP1P56182 461 aaKnown RBP10.54□□□□□ -0.72
SP140-207ENST00000456542 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
SP140-207ENST00000456542 CAVIN4Q5BKX8 364 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 CEP85Q6P2H3 762 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 FBXO33Q7Z6M2 555 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
SP140-207ENST00000456542 TDRD7Q8NHU6 1098 aaKnown RBP10.54□□□□□ -0.72
SP140-207ENST00000456542 FAM205AQ6ZU69 1335 aa10.54□□□□□ -0.72
SP140-207ENST00000456542 ZBTB22O15209 634 aa10.53□□□□□ -0.72
SP140-207ENST00000456542 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
SP140-207ENST00000456542 ZNF280AP59817 542 aaPredicted RBP10.53□□□□□ -0.72
SP140-207ENST00000456542 FKBP1AP62942 108 aaKnown RBP10.53□□□□□ -0.72
SP140-207ENST00000456542 GTF2IP78347 998 aa10.53□□□□□ -0.72
SP140-207ENST00000456542 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.72
SP140-207ENST00000456542 VPS37DQ86XT2 251 aa10.53□□□□□ -0.72
SP140-207ENST00000456542 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms