RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 WDR90Q96KV7 1748 aa18.27■□□□□ 0.52
CLCN1-203ENST00000455478 G3V3G9 751 aa18.27■□□□□ 0.52
CLCN1-203ENST00000455478 IL15P40933 162 aaPredicted RBP18.27■□□□□ 0.52
CLCN1-203ENST00000455478 DCAF8Q5TAQ9 597 aa18.27■□□□□ 0.52
CLCN1-203ENST00000455478 CIAPIN1Q6FI81 312 aa18.27■□□□□ 0.52
CLCN1-203ENST00000455478 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
CLCN1-203ENST00000455478 COA1Q9GZY4 146 aa18.27■□□□□ 0.52
CLCN1-203ENST00000455478 GJA3Q9Y6H8 435 aa18.27■□□□□ 0.52
CLCN1-203ENST00000455478 FGFR2P21802 821 aa18.26■□□□□ 0.51
CLCN1-203ENST00000455478 TNIP1Q15025 636 aa18.26■□□□□ 0.51
CLCN1-203ENST00000455478 PODNQ7Z5L7 613 aa18.26■□□□□ 0.51
CLCN1-203ENST00000455478 SIRT2Q8IXJ6 389 aa18.26■□□□□ 0.51
CLCN1-203ENST00000455478 CEP126Q9P2H0 1117 aa18.26■□□□□ 0.51
CLCN1-203ENST00000455478 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
CLCN1-203ENST00000455478 KIF3CO14782 793 aa18.25■□□□□ 0.51
CLCN1-203ENST00000455478 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
CLCN1-203ENST00000455478 PSMD14O00487 310 aa18.24■□□□□ 0.51
CLCN1-203ENST00000455478 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
CLCN1-203ENST00000455478 PUM3Q15397 648 aaKnown RBP18.24■□□□□ 0.51
CLCN1-203ENST00000455478 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
CLCN1-203ENST00000455478 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
CLCN1-203ENST00000455478 CD209Q9NNX6 404 aa18.24■□□□□ 0.51
CLCN1-203ENST00000455478 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
CLCN1-203ENST00000455478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
CLCN1-203ENST00000455478 VIL1P09327 827 aaKnown RBP18.23■□□□□ 0.51
CLCN1-203ENST00000455478 GYG1P46976 350 aa18.23■□□□□ 0.51
CLCN1-203ENST00000455478 TFCP2Q12800 502 aa18.23■□□□□ 0.51
CLCN1-203ENST00000455478 G3BP1Q13283 466 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLCN1-203ENST00000455478 LPIN2Q92539 896 aa18.23■□□□□ 0.51
CLCN1-203ENST00000455478 PSME4Q14997 1843 aa18.22■□□□□ 0.51
CLCN1-203ENST00000455478 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
CLCN1-203ENST00000455478 SASH1O94885 1247 aa18.22■□□□□ 0.51
CLCN1-203ENST00000455478 IL1R1P14778 569 aa18.22■□□□□ 0.51
CLCN1-203ENST00000455478 GMPSP49915 693 aaPredicted RBP18.22■□□□□ 0.51
CLCN1-203ENST00000455478 SCNN1DP51172 638 aa18.22■□□□□ 0.51
CLCN1-203ENST00000455478 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
CLCN1-203ENST00000455478 FBXO33Q7Z6M2 555 aa18.22■□□□□ 0.51
CLCN1-203ENST00000455478 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
CLCN1-203ENST00000455478 SCN4AP35499 1836 aa18.21■□□□□ 0.51
CLCN1-203ENST00000455478 USP17L3A6NCW0 530 aa18.21■□□□□ 0.51
CLCN1-203ENST00000455478 USP17L4A6NCW7 530 aa18.21■□□□□ 0.51
CLCN1-203ENST00000455478 IFIT1P09914 478 aaKnown RBP18.21■□□□□ 0.51
CLCN1-203ENST00000455478 HIBADHP31937 336 aaKnown RBP18.21■□□□□ 0.51
CLCN1-203ENST00000455478 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
CLCN1-203ENST00000455478 USP17L1Q7RTZ2 530 aa18.21■□□□□ 0.51
CLCN1-203ENST00000455478 SLC5A1P13866 664 aa18.2■□□□□ 0.5
CLCN1-203ENST00000455478 EPS15P42566 896 aa18.2■□□□□ 0.5
CLCN1-203ENST00000455478 BCAMP50895 628 aa18.2■□□□□ 0.5
CLCN1-203ENST00000455478 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
CLCN1-203ENST00000455478 TAF1DQ9H5J8 278 aaPredicted RBP18.2■□□□□ 0.5
CLCN1-203ENST00000455478 GPRC5DQ9NZD1 345 aa18.2■□□□□ 0.5
CLCN1-203ENST00000455478 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
CLCN1-203ENST00000455478 ZNF646O15015 1829 aaPredicted RBP18.2■□□□□ 0.5
CLCN1-203ENST00000455478 IQCA1LA6NCM1 817 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 TIMM10P62072 90 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 CAVIN4Q5BKX8 364 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 STRIP1Q5VSL9 837 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 RSBN1LQ6PCB5 846 aaPredicted RBP18.19■□□□□ 0.5
CLCN1-203ENST00000455478 DPF2Q92785 391 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 GMLQ99445 158 aa18.19■□□□□ 0.5
CLCN1-203ENST00000455478 HMMRO75330 724 aa18.18■□□□□ 0.5
CLCN1-203ENST00000455478 RPS12P25398 132 aaKnown RBP18.18■□□□□ 0.5
CLCN1-203ENST00000455478 GTF2IP78347 998 aa18.18■□□□□ 0.5
CLCN1-203ENST00000455478 OS9Q13438 667 aaPredicted RBP18.18■□□□□ 0.5
CLCN1-203ENST00000455478 MXD3Q9BW11 206 aa18.18■□□□□ 0.5
CLCN1-203ENST00000455478 CNOT7Q9UIV1 285 aaKnown RBP18.18■□□□□ 0.5
CLCN1-203ENST00000455478 EXOC6BQ9Y2D4 811 aa18.18■□□□□ 0.5
CLCN1-203ENST00000455478 AKAP2Q9Y2D5 859 aa18.18■□□□□ 0.5
CLCN1-203ENST00000455478 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
CLCN1-203ENST00000455478 A0A1B0GUL7 405 aa18.17■□□□□ 0.5
CLCN1-203ENST00000455478 SHTN1A0MZ66 631 aa18.17■□□□□ 0.5
CLCN1-203ENST00000455478 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
CLCN1-203ENST00000455478 ADORA1P30542 326 aa18.17■□□□□ 0.5
CLCN1-203ENST00000455478 EPHX2P34913 555 aa18.17■□□□□ 0.5
CLCN1-203ENST00000455478 ZNF609O15014 1411 aa18.16■□□□□ 0.5
CLCN1-203ENST00000455478 VPS37DQ86XT2 251 aa18.16■□□□□ 0.5
CLCN1-203ENST00000455478 AGBL3Q8NEM8 1001 aa18.16■□□□□ 0.5
CLCN1-203ENST00000455478 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
CLCN1-203ENST00000455478 GPR108Q9NPR9 543 aa18.16■□□□□ 0.5
CLCN1-203ENST00000455478 IQSEC3Q9UPP2 1182 aaPredicted RBP18.16■□□□□ 0.5
CLCN1-203ENST00000455478 FAM205AQ6ZU69 1335 aa18.16■□□□□ 0.5
CLCN1-203ENST00000455478 TOMM70O94826 608 aa18.15■□□□□ 0.5
CLCN1-203ENST00000455478 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
CLCN1-203ENST00000455478 MICALL2Q8IY33 904 aa18.15■□□□□ 0.5
CLCN1-203ENST00000455478 C16orf71Q8IYS4 520 aaPredicted RBP18.15■□□□□ 0.5
CLCN1-203ENST00000455478 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
CLCN1-203ENST00000455478 XAGE2Q96GT9 111 aa18.15■□□□□ 0.5
CLCN1-203ENST00000455478 ARAP2Q8WZ64 1704 aa18.15■□□□□ 0.5
CLCN1-203ENST00000455478 H7C1D1 291 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 POTEIP0CG38 1075 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 POTEJP0CG39 1038 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 PHKA1P46020 1223 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 TNNI3KQ59H18 835 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 CERS5Q8N5B7 392 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 JAG2Q9Y219 1238 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 FPGT-TNNI3KV9GXZ4 949 aa18.14■□□□□ 0.49
CLCN1-203ENST00000455478 ZNF280AP59817 542 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms