RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
CDC42EP3-203ENST00000453555 GGA1Q9UJY5 639 aa11.99□□□□□ -0.49
CDC42EP3-203ENST00000453555 A0A1B0GUL6 1792 aa11.99□□□□□ -0.49
CDC42EP3-203ENST00000453555 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
CDC42EP3-203ENST00000453555 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 XDHP47989 1333 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 G3V3G9 751 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 GRM8O00222 908 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 ECE2O60344 883 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 CSF1RP07333 972 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 IGHMBP2P38935 993 aaKnown RBP11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 PSEN1P49768 467 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 SCNN1DP51172 638 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 FOXO4P98177 505 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 SMC4Q9NTJ3 1288 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 BSDC1Q9NW68 430 aaPredicted RBP11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 CHMP3Q9Y3E7 222 aa11.98□□□□□ -0.49
CDC42EP3-203ENST00000453555 PSME4Q14997 1843 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 WTIPA6NIX2 430 aaPredicted RBP11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 GMPSP49915 693 aaPredicted RBP11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 TNIP1Q15025 636 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 EPHA10Q5JZY3 1008 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 PNMA8AQ86V59 439 aaPredicted RBP11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 KCNQ5Q9NR82 932 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 MINPP1Q9UNW1 487 aa11.97□□□□□ -0.49
CDC42EP3-203ENST00000453555 PTPRCP08575 1304 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 PSMD14O00487 310 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 ATP2B4P23634 1241 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 MPHOSPH8Q99549 860 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.49
CDC42EP3-203ENST00000453555 NBPF7P0C2Y1 421 aaPredicted RBP11.95□□□□□ -0.5
CDC42EP3-203ENST00000453555 CCT4P50991 539 aaKnown RBP11.95□□□□□ -0.5
CDC42EP3-203ENST00000453555 SUCLG2Q96I99 432 aa11.95□□□□□ -0.5
CDC42EP3-203ENST00000453555 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
CDC42EP3-203ENST00000453555 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 TRPM7Q96QT4 1865 aa11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 CT47B1P0C2W7 299 aaPredicted RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 IFIT5Q13325 482 aaKnown RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 USP50Q70EL3 339 aaPredicted RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 CNTROBQ8N137 903 aa11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 ADARB2Q9NS39 739 aaKnown RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 CNOT7Q9UIV1 285 aaKnown RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
CDC42EP3-203ENST00000453555 ZNF646O15015 1829 aaPredicted RBP11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 TAF5LO75529 589 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 CHRNDQ07001 517 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 PDAP1Q13442 181 aaKnown RBP11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 CCDC57Q2TAC2 916 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 ANKRD2Q9GZV1 360 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 CEP350Q5VT06 3117 aa11.93□□□□□ -0.5
CDC42EP3-203ENST00000453555 UTYO14607 1347 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 PASKQ96RG2 1323 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 H7C1D1 291 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 KCNJ4P48050 445 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 TRPM4Q8TD43 1214 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 LEMD3Q9Y2U8 911 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
CDC42EP3-203ENST00000453555 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 SNAP23O00161 211 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 PLIN1O60240 522 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 VIL1P09327 827 aaKnown RBP11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 KLRK1P26718 216 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 HIRAP54198 1017 aaPredicted RBP11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 KLRG1Q96E93 195 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 CNNM1Q9NRU3 951 aa11.91□□□□□ -0.5
CDC42EP3-203ENST00000453555 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.5
CDC42EP3-203ENST00000453555 TBC1D10BQ4KMP7 808 aaPredicted RBP11.9□□□□□ -0.5
CDC42EP3-203ENST00000453555 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
CDC42EP3-203ENST00000453555 DPF2Q92785 391 aa11.9□□□□□ -0.5
CDC42EP3-203ENST00000453555 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
CDC42EP3-203ENST00000453555 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 TRAF5O00463 557 aa11.89□□□□□ -0.51
CDC42EP3-203ENST00000453555 BCAR3O75815 825 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms