RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
VCX3B-204ENST00000453306 POLA2Q14181 598 aa19.55■□□□□ 0.72
VCX3B-204ENST00000453306 ZC3H15Q8WU90 426 aaKnown RBP19.55■□□□□ 0.72
VCX3B-204ENST00000453306 PA2G4Q9UQ80 394 aaKnown RBP19.55■□□□□ 0.72
VCX3B-204ENST00000453306 LAMB2P55268 1798 aa19.55■□□□□ 0.72
VCX3B-204ENST00000453306 RAD17O75943 681 aa19.54■□□□□ 0.72
VCX3B-204ENST00000453306 LBX1P52954 281 aa19.54■□□□□ 0.72
VCX3B-204ENST00000453306 SSH3Q8TE77 659 aa19.54■□□□□ 0.72
VCX3B-204ENST00000453306 CAPNS2Q96L46 248 aa19.54■□□□□ 0.72
VCX3B-204ENST00000453306 TLL2Q9Y6L7 1015 aa19.54■□□□□ 0.72
VCX3B-204ENST00000453306 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
VCX3B-204ENST00000453306 WTIPA6NIX2 430 aaPredicted RBP19.53■□□□□ 0.72
VCX3B-204ENST00000453306 TRAF5O00463 557 aa19.53■□□□□ 0.72
VCX3B-204ENST00000453306 SRGAP3O43295 1099 aa19.53■□□□□ 0.72
VCX3B-204ENST00000453306 IFIT5Q13325 482 aaKnown RBP19.53■□□□□ 0.72
VCX3B-204ENST00000453306 WASHC4Q2M389 1173 aa19.53■□□□□ 0.72
VCX3B-204ENST00000453306 CST9Q5W186 159 aa19.53■□□□□ 0.72
VCX3B-204ENST00000453306 H7C1D1 291 aa19.52■□□□□ 0.72
VCX3B-204ENST00000453306 LRRC24Q50LG9 513 aa19.52■□□□□ 0.72
VCX3B-204ENST00000453306 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
VCX3B-204ENST00000453306 PGAP2Q9UHJ9 254 aa19.52■□□□□ 0.72
VCX3B-204ENST00000453306 HDAC5Q9UQL6 1122 aa19.52■□□□□ 0.72
VCX3B-204ENST00000453306 HSPA8P11142 646 aaKnown RBP19.51■□□□□ 0.71
VCX3B-204ENST00000453306 FMR1Q06787 632 aaKnown RBP eCLIP19.51■□□□□ 0.71
VCX3B-204ENST00000453306 GRM1Q13255 1194 aa19.51■□□□□ 0.71
VCX3B-204ENST00000453306 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
VCX3B-204ENST00000453306 CYP4F22Q6NT55 531 aa19.51■□□□□ 0.71
VCX3B-204ENST00000453306 EYA3Q99504 573 aa19.51■□□□□ 0.71
VCX3B-204ENST00000453306 CNOT7Q9UIV1 285 aaKnown RBP19.51■□□□□ 0.71
VCX3B-204ENST00000453306 NSFL1CQ9UNZ2 370 aaKnown RBP19.51■□□□□ 0.71
VCX3B-204ENST00000453306 RIPOR2Q9Y4F9 1068 aa19.51■□□□□ 0.71
VCX3B-204ENST00000453306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.51■□□□□ 0.71
VCX3B-204ENST00000453306 CELF2O95319 508 aaKnown RBP19.5■□□□□ 0.71
VCX3B-204ENST00000453306 MAP2K2P36507 400 aa19.5■□□□□ 0.71
VCX3B-204ENST00000453306 CDC37L1Q7L3B6 337 aa19.5■□□□□ 0.71
VCX3B-204ENST00000453306 ATG9AQ7Z3C6 839 aa19.5■□□□□ 0.71
VCX3B-204ENST00000453306 ANKRD18AQ8IVF6 992 aa19.5■□□□□ 0.71
VCX3B-204ENST00000453306 RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
VCX3B-204ENST00000453306 COPRSQ9NQ92 184 aa19.5■□□□□ 0.71
VCX3B-204ENST00000453306 BSDC1Q9NW68 430 aaPredicted RBP19.5■□□□□ 0.71
VCX3B-204ENST00000453306 TAF1P21675 1872 aa19.5■□□□□ 0.71
VCX3B-204ENST00000453306 C6orf229H3BNL8 230 aa19.49■□□□□ 0.71
VCX3B-204ENST00000453306 DPF2Q92785 391 aa19.49■□□□□ 0.71
VCX3B-204ENST00000453306 HHIPL1Q96JK4 782 aa19.49■□□□□ 0.71
VCX3B-204ENST00000453306 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
VCX3B-204ENST00000453306 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
VCX3B-204ENST00000453306 MINPP1Q9UNW1 487 aa19.49■□□□□ 0.71
VCX3B-204ENST00000453306 TRPM7Q96QT4 1865 aa19.49■□□□□ 0.71
VCX3B-204ENST00000453306 YDJCA8MPS7 323 aa19.48■□□□□ 0.71
VCX3B-204ENST00000453306 SNAP23O00161 211 aa19.48■□□□□ 0.71
VCX3B-204ENST00000453306 SAPCD2Q86UD0 394 aa19.48■□□□□ 0.71
VCX3B-204ENST00000453306 GLIS2Q9BZE0 524 aaPredicted RBP19.48■□□□□ 0.71
VCX3B-204ENST00000453306 SIL1Q9H173 461 aa19.48■□□□□ 0.71
VCX3B-204ENST00000453306 RPS12P25398 132 aaKnown RBP19.47■□□□□ 0.71
VCX3B-204ENST00000453306 GPSM2P81274 684 aa19.47■□□□□ 0.71
VCX3B-204ENST00000453306 LDHAL6AQ6ZMR3 332 aa19.47■□□□□ 0.71
VCX3B-204ENST00000453306 MICALL2Q8IY33 904 aa19.47■□□□□ 0.71
VCX3B-204ENST00000453306 HELBQ8NG08 1087 aaPredicted RBP19.47■□□□□ 0.71
VCX3B-204ENST00000453306 LRRC37AA6NMS7 1700 aa19.47■□□□□ 0.71
VCX3B-204ENST00000453306 THSD7BQ9C0I4 1608 aa19.47■□□□□ 0.71
VCX3B-204ENST00000453306 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 EYA2O00167 538 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 RIMBP2O15034 1052 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 CA12O43570 354 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 IGHDP01880 384 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 IGHMBP2P38935 993 aaKnown RBP19.46■□□□□ 0.71
VCX3B-204ENST00000453306 HIRAP54198 1017 aaPredicted RBP19.46■□□□□ 0.71
VCX3B-204ENST00000453306 TRPM4Q8TD43 1214 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 ZNF408Q9H9D4 720 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 DBNDD1Q9H9R9 158 aa19.46■□□□□ 0.71
VCX3B-204ENST00000453306 NOP58Q9Y2X3 529 aaKnown RBP19.46■□□□□ 0.71
VCX3B-204ENST00000453306 G3V3G9 751 aa19.45■□□□□ 0.7
VCX3B-204ENST00000453306 PSMD14O00487 310 aa19.45■□□□□ 0.7
VCX3B-204ENST00000453306 CHRNDQ07001 517 aa19.45■□□□□ 0.7
VCX3B-204ENST00000453306 DCAF8Q5TAQ9 597 aa19.45■□□□□ 0.7
VCX3B-204ENST00000453306 MPHOSPH8Q99549 860 aa19.45■□□□□ 0.7
VCX3B-204ENST00000453306 ZC3H12CQ9C0D7 883 aaKnown RBP19.45■□□□□ 0.7
VCX3B-204ENST00000453306 POLLQ9UGP5 575 aa19.45■□□□□ 0.7
VCX3B-204ENST00000453306 ECE2O60344 883 aa19.44■□□□□ 0.7
VCX3B-204ENST00000453306 TAF5LO75529 589 aa19.44■□□□□ 0.7
VCX3B-204ENST00000453306 SASH1O94885 1247 aa19.44■□□□□ 0.7
VCX3B-204ENST00000453306 TAF7LQ5H9L4 462 aa19.44■□□□□ 0.7
VCX3B-204ENST00000453306 VGLL2Q8N8G2 317 aa19.44■□□□□ 0.7
VCX3B-204ENST00000453306 ZBTB12Q9Y330 459 aaPredicted RBP19.44■□□□□ 0.7
VCX3B-204ENST00000453306 SURF6O75683 361 aaKnown RBP19.43■□□□□ 0.7
VCX3B-204ENST00000453306 CIAO1O76071 339 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 AAMPQ13685 434 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 TBC1D16Q8TBP0 767 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 CNNM1Q9NRU3 951 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 PODXL2Q9NZ53 605 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 ANKIB1Q9P2G1 1089 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 EXOC6BQ9Y2D4 811 aa19.43■□□□□ 0.7
VCX3B-204ENST00000453306 AOC2O75106 756 aa19.42■□□□□ 0.7
VCX3B-204ENST00000453306 DOK7Q18PE1 504 aa19.42■□□□□ 0.7
VCX3B-204ENST00000453306 USP48Q86UV5 1035 aa19.42■□□□□ 0.7
VCX3B-204ENST00000453306 DCPSQ96C86 337 aaKnown RBP19.42■□□□□ 0.7
VCX3B-204ENST00000453306 MYH3P11055 1940 aa19.41■□□□□ 0.7
VCX3B-204ENST00000453306 KLRK1P26718 216 aa19.41■□□□□ 0.7
VCX3B-204ENST00000453306 HDAC1Q13547 482 aaPredicted RBP19.41■□□□□ 0.7
VCX3B-204ENST00000453306 TBC1D10BQ4KMP7 808 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms