RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 NR1I2O75469 434 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
DDR1-239ENST00000452441 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 TRIM29Q14134 588 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 LRRC37A3O60309 1634 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 AOX1Q06278 1338 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 CMTR1Q8N1G2 835 aaKnown RBP13.06□□□□□ -0.32
DDR1-239ENST00000452441 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 TDO2P48775 406 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
DDR1-239ENST00000452441 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 TTC14Q96N46 770 aa13.06□□□□□ -0.32
DDR1-239ENST00000452441 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
DDR1-239ENST00000452441 ARHGAP23Q9P227 1491 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
DDR1-239ENST00000452441 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
DDR1-239ENST00000452441 ADCY9O60503 1353 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 RPS6KB1P23443 525 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
DDR1-239ENST00000452441 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 NRDCO43847 1150 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
DDR1-239ENST00000452441 DDB1Q16531 1140 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 MIGA1Q8NAN2 632 aa13.05□□□□□ -0.32
DDR1-239ENST00000452441 IMMTQ16891 758 aaKnown RBP13.04□□□□□ -0.32
DDR1-239ENST00000452441 KLHL10Q6JEL2 608 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■□□ 17.5
DDR1-239ENST00000452441 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
DDR1-239ENST00000452441 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
DDR1-239ENST00000452441 ZNF213O14771 459 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 POLA2Q14181 598 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 KRT32Q14532 448 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
DDR1-239ENST00000452441 CFAP45Q9UL16 551 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 SLIT1O75093 1534 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 ADORA1P30542 326 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
DDR1-239ENST00000452441 SLC9C2Q5TAH2 1124 aa13.04□□□□□ -0.32
DDR1-239ENST00000452441 SERPINC1P01008 464 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 CYP21A2P08686 494 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
DDR1-239ENST00000452441 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDR1-239ENST00000452441 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 ANKARQ7Z5J8 1434 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 TNNT1P13805 278 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
DDR1-239ENST00000452441 EYA2O00167 538 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 PHKBQ93100 1093 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 INCENPQ9NQS7 918 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 PYCARDQ9ULZ3 195 aa13.03□□□□□ -0.32
DDR1-239ENST00000452441 ERICH2A1L162 156 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 IGHMBP2P38935 993 aaKnown RBP13.02□□□□□ -0.33
DDR1-239ENST00000452441 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.33
DDR1-239ENST00000452441 TMEM87AQ8NBN3 555 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.33
DDR1-239ENST00000452441 ITGA6P23229 1130 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
DDR1-239ENST00000452441 MTERF4Q7Z6M4 381 aaKnown RBP13.01□□□□□ -0.33
DDR1-239ENST00000452441 CBX8Q9HC52 389 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 ZAP70P43403 619 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 TPM4P67936 248 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
DDR1-239ENST00000452441 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 HMGN5P82970 282 aaKnown RBP13.01□□□□□ -0.33
DDR1-239ENST00000452441 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
DDR1-239ENST00000452441 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
DDR1-239ENST00000452441 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
DDR1-239ENST00000452441 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
DDR1-239ENST00000452441 NAPBQ9H115 298 aa13□□□□□ -0.33
DDR1-239ENST00000452441 PXDNQ92626 1479 aa13□□□□□ -0.33
DDR1-239ENST00000452441 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
DDR1-239ENST00000452441 PRC1O43663 620 aa13□□□□□ -0.33
DDR1-239ENST00000452441 CFAP100Q494V2 611 aa13□□□□□ -0.33
DDR1-239ENST00000452441 ZNF771Q7L3S4 317 aaPredicted RBP13□□□□□ -0.33
DDR1-239ENST00000452441 MAP4K1Q92918 833 aa13□□□□□ -0.33
DDR1-239ENST00000452441 AIFM3Q96NN9 605 aa13□□□□□ -0.33
DDR1-239ENST00000452441 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
DDR1-239ENST00000452441 SCRN1Q12765 414 aa13□□□□□ -0.33
DDR1-239ENST00000452441 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms