RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
LINC01004-202ENST00000450686 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
LINC01004-202ENST00000450686 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
LINC01004-202ENST00000450686 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
LINC01004-202ENST00000450686 SCARF1Q14162 830 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 RGMBQ6NW40 437 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 PI4KAP1Q8N8J0 262 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 CCDC191Q8NCU4 936 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 HHIPL1Q96JK4 782 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 GREM2Q9H772 168 aa13.1□□□□□ -0.31
LINC01004-202ENST00000450686 HAX1O00165 279 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 KLRK1P26718 216 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
LINC01004-202ENST00000450686 CTSWP56202 376 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 NOGQ13253 232 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 DGKZQ13574 1117 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
LINC01004-202ENST00000450686 ANKRD18AQ8IVF6 992 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 C2orf69Q8N8R5 385 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 AKAP11Q9UKA4 1901 aa13.09□□□□□ -0.31
LINC01004-202ENST00000450686 CCDC30Q5VVM6 783 aa13.08□□□□□ -0.32
LINC01004-202ENST00000450686 TXNRD3Q86VQ6 643 aa13.08□□□□□ -0.32
LINC01004-202ENST00000450686 SULF1Q8IWU6 871 aa13.08□□□□□ -0.32
LINC01004-202ENST00000450686 XDHP47989 1333 aa13.08□□□□□ -0.32
LINC01004-202ENST00000450686 TRPA1O75762 1119 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 NUBP1P53384 320 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 ZNF280AP59817 542 aaPredicted RBP13.07□□□□□ -0.32
LINC01004-202ENST00000450686 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 TTLL11Q8NHH1 800 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 GMLQ99445 158 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 MYOZ2Q9NPC6 264 aa13.07□□□□□ -0.32
LINC01004-202ENST00000450686 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 SNAP23O00161 211 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 CA12O43570 354 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 SASH1O94885 1247 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
LINC01004-202ENST00000450686 USP17L8P0C7I0 530 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
LINC01004-202ENST00000450686 RNF186Q9NXI6 227 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 MINPP1Q9UNW1 487 aa13.06□□□□□ -0.32
LINC01004-202ENST00000450686 SALL2Q9Y467 1007 aaPredicted RBP13.06□□□□□ -0.32
LINC01004-202ENST00000450686 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 UBE2Q2LH0YL09 131 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 SLC10A3P09131 477 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
LINC01004-202ENST00000450686 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
LINC01004-202ENST00000450686 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
LINC01004-202ENST00000450686 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
LINC01004-202ENST00000450686 PAPPA2Q9BXP8 1791 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
LINC01004-202ENST00000450686 SOX10P56693 466 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 MLLT1Q03111 559 aaPredicted RBP13.04□□□□□ -0.32
LINC01004-202ENST00000450686 EVX2Q03828 476 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 TWISTNBQ3B726 338 aaPredicted RBP13.04□□□□□ -0.32
LINC01004-202ENST00000450686 DACT2Q5SW24 774 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 AGBL3Q8NEM8 1001 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
LINC01004-202ENST00000450686 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 MED23Q9ULK4 1368 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 PDE4DIPQ5VU43 2346 aa13.04□□□□□ -0.32
LINC01004-202ENST00000450686 HSP90B1P14625 803 aaKnown RBP13.03□□□□□ -0.32
LINC01004-202ENST00000450686 PRKG1Q13976 671 aa13.03□□□□□ -0.32
LINC01004-202ENST00000450686 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
LINC01004-202ENST00000450686 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
LINC01004-202ENST00000450686 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
LINC01004-202ENST00000450686 ZNF609O15014 1411 aa13.03□□□□□ -0.32
LINC01004-202ENST00000450686 H7C1W4 665 aa13.02□□□□□ -0.33
LINC01004-202ENST00000450686 ITGA6P23229 1130 aa13.02□□□□□ -0.33
LINC01004-202ENST00000450686 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
LINC01004-202ENST00000450686 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
LINC01004-202ENST00000450686 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
LINC01004-202ENST00000450686 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
LINC01004-202ENST00000450686 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
LINC01004-202ENST00000450686 CASP7P55210 303 aa13.01□□□□□ -0.33
LINC01004-202ENST00000450686 FLIIQ13045 1269 aa13.01□□□□□ -0.33
LINC01004-202ENST00000450686 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
LINC01004-202ENST00000450686 GCKRQ14397 625 aa13.01□□□□□ -0.33
LINC01004-202ENST00000450686 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
LINC01004-202ENST00000450686 KIAA0825Q8IV33 1275 aa13.01□□□□□ -0.33
LINC01004-202ENST00000450686 FANCIQ9NVI1 1328 aa13.01□□□□□ -0.33
LINC01004-202ENST00000450686 ZNF804BA4D1E1 1349 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 AOX1Q06278 1338 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 F6X3S4 739 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 WNT10BO00744 389 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 TAF5LO75529 589 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 TBC1D8O95759 1140 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms