RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 COL13A1Q5TAT6 717 aaPredicted RBP21.94■■□□□ 1.1
CLTCL1-203ENST00000449918 ZNF408Q9H9D4 720 aa21.94■■□□□ 1.1
CLTCL1-203ENST00000449918 ZNF609O15014 1411 aa21.94■■□□□ 1.1
CLTCL1-203ENST00000449918 GMLQ99445 158 aa21.93■■□□□ 1.1
CLTCL1-203ENST00000449918 MAP2K1Q02750 393 aaPredicted RBP21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 EPHA10Q5JZY3 1008 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 STRIP1Q5VSL9 837 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 SAPCD2Q86UD0 394 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 TXNRD3Q86VQ6 643 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 SSH1Q8WYL5 1049 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 CDCA7LQ96GN5 454 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 CAPNS2Q96L46 248 aa21.92■■□□□ 1.1
CLTCL1-203ENST00000449918 MYO3BQ8WXR4 1341 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 SCN9AQ15858 1988 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 ALDH1L2Q3SY69 923 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 LDHAL6AQ6ZMR3 332 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 SULF1Q8IWU6 871 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 OGFOD1Q8N543 542 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 FBXW7Q969H0 707 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 HHIPL1Q96JK4 782 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 WBP1LQ9NX94 342 aa21.91■■□□□ 1.1
CLTCL1-203ENST00000449918 DACT2Q5SW24 774 aa21.9■■□□□ 1.1
CLTCL1-203ENST00000449918 TTLL5Q6EMB2 1281 aa21.9■■□□□ 1.1
CLTCL1-203ENST00000449918 CYP4F22Q6NT55 531 aa21.9■■□□□ 1.1
CLTCL1-203ENST00000449918 MYOZ2Q9NPC6 264 aa21.9■■□□□ 1.1
CLTCL1-203ENST00000449918 CNNM1Q9NRU3 951 aa21.9■■□□□ 1.1
CLTCL1-203ENST00000449918 TRPM7Q96QT4 1865 aa21.9■■□□□ 1.1
CLTCL1-203ENST00000449918 UTYO14607 1347 aa21.89■■□□□ 1.1
CLTCL1-203ENST00000449918 TAF5LO75529 589 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 NBPF7P0C2Y1 421 aaPredicted RBP21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 KLRK1P26718 216 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 MMP14P50281 582 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 GRM1Q13255 1194 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 SCARF1Q14162 830 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 TRMT2AQ8IZ69 625 aaKnown RBP21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 HELBQ8NG08 1087 aaPredicted RBP21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 GGA3Q9NZ52 723 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 SPEF2Q9C093 1822 aa21.89■■□□□ 1.09
CLTCL1-203ENST00000449918 FOXN1O15353 648 aa21.88■■□□□ 1.09
CLTCL1-203ENST00000449918 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
CLTCL1-203ENST00000449918 CTCFP49711 727 aaPredicted RBP21.88■■□□□ 1.09
CLTCL1-203ENST00000449918 C15orf52Q6ZUT6 534 aaKnown RBP21.88■■□□□ 1.09
CLTCL1-203ENST00000449918 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
CLTCL1-203ENST00000449918 ZNF594Q96JF6 807 aaPredicted RBP21.88■■□□□ 1.09
CLTCL1-203ENST00000449918 ADM5C9JUS6 153 aa21.87■■□□□ 1.09
CLTCL1-203ENST00000449918 MAP2K2P36507 400 aa21.87■■□□□ 1.09
CLTCL1-203ENST00000449918 CD209Q9NNX6 404 aa21.87■■□□□ 1.09
CLTCL1-203ENST00000449918 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
CLTCL1-203ENST00000449918 PLIN1O60240 522 aa21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 ANGEL2Q5VTE6 544 aaKnown RBP21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 C2orf69Q8N8R5 385 aa21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 KAZALD1Q96I82 304 aa21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 BEGAINQ9BUH8 593 aa21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 MXD3Q9BW11 206 aa21.86■■□□□ 1.09
CLTCL1-203ENST00000449918 ASTN2O75129 1339 aaPredicted RBP21.85■■□□□ 1.09
CLTCL1-203ENST00000449918 GTF2IP78347 998 aa21.85■■□□□ 1.09
CLTCL1-203ENST00000449918 DLK2Q6UY11 383 aa21.85■■□□□ 1.09
CLTCL1-203ENST00000449918 ZNF804AQ7Z570 1209 aa21.85■■□□□ 1.09
CLTCL1-203ENST00000449918 HDAC9Q9UKV0 1011 aa21.85■■□□□ 1.09
CLTCL1-203ENST00000449918 PITPNM2Q9BZ72 1349 aa21.84■■□□□ 1.09
CLTCL1-203ENST00000449918 SNAP23O00161 211 aa21.84■■□□□ 1.09
CLTCL1-203ENST00000449918 HUNKP57058 714 aa21.84■■□□□ 1.09
CLTCL1-203ENST00000449918 BICC1Q9H694 974 aaKnown RBP21.84■■□□□ 1.09
CLTCL1-203ENST00000449918 GBA2Q9HCG7 927 aaPredicted RBP21.84■■□□□ 1.09
CLTCL1-203ENST00000449918 PRDM10Q9NQV6 1147 aa21.84■■□□□ 1.09
CLTCL1-203ENST00000449918 RABL6Q3YEC7 729 aaPredicted RBP21.83■■□□□ 1.09
CLTCL1-203ENST00000449918 PSME4Q14997 1843 aa21.83■■□□□ 1.08
CLTCL1-203ENST00000449918 IRS2Q9Y4H2 1338 aa21.82■■□□□ 1.08
CLTCL1-203ENST00000449918 IL1R1P14778 569 aa21.82■■□□□ 1.08
CLTCL1-203ENST00000449918 KIAA0825Q8IV33 1275 aa21.82■■□□□ 1.08
CLTCL1-203ENST00000449918 CDCA5Q96FF9 252 aa21.82■■□□□ 1.08
CLTCL1-203ENST00000449918 USP44Q9H0E7 712 aa21.82■■□□□ 1.08
CLTCL1-203ENST00000449918 AOC2O75106 756 aa21.81■■□□□ 1.08
CLTCL1-203ENST00000449918 UBE4AQ14139 1066 aa21.81■■□□□ 1.08
CLTCL1-203ENST00000449918 MROH5Q6ZUA9 1318 aa21.8■■□□□ 1.08
CLTCL1-203ENST00000449918 WNT10BO00744 389 aa21.8■■□□□ 1.08
CLTCL1-203ENST00000449918 LBX1P52954 281 aa21.8■■□□□ 1.08
CLTCL1-203ENST00000449918 NBPF9Q3BBW0 867 aa21.8■■□□□ 1.08
CLTCL1-203ENST00000449918 ANKRD44Q8N8A2 993 aa21.8■■□□□ 1.08
CLTCL1-203ENST00000449918 RIPOR2Q9Y4F9 1068 aa21.8■■□□□ 1.08
CLTCL1-203ENST00000449918 BRPF1P55201 1214 aaPredicted RBP21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 FKBP1AP62942 108 aaKnown RBP21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 NOGQ13253 232 aa21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 RGMBQ6NW40 437 aa21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 CCDC102AQ96A19 550 aa21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 PUS3Q9BZE2 481 aaKnown RBP21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 NOB1Q9ULX3 412 aaKnown RBP21.79■■□□□ 1.08
CLTCL1-203ENST00000449918 SASH1O94885 1247 aa21.78■■□□□ 1.08
CLTCL1-203ENST00000449918 API5Q9BZZ5 524 aaKnown RBP21.78■■□□□ 1.08
CLTCL1-203ENST00000449918 POLR2AP24928 1970 aaKnown RBP21.78■■□□□ 1.08
CLTCL1-203ENST00000449918 HSPA8P11142 646 aaKnown RBP21.77■■□□□ 1.08
CLTCL1-203ENST00000449918 HIBADHP31937 336 aaKnown RBP21.77■■□□□ 1.08
CLTCL1-203ENST00000449918 ZNF157P51786 506 aaPredicted RBP21.77■■□□□ 1.08
CLTCL1-203ENST00000449918 FKBP1BP68106 108 aa21.77■■□□□ 1.08
CLTCL1-203ENST00000449918 CA12O43570 354 aa21.76■■□□□ 1.07
CLTCL1-203ENST00000449918 DLGAP5Q15398 846 aa21.76■■□□□ 1.07
CLTCL1-203ENST00000449918 METTL24Q5JXM2 366 aa21.76■■□□□ 1.07
CLTCL1-203ENST00000449918 HDAC5Q9UQL6 1122 aa21.76■■□□□ 1.07
CLTCL1-203ENST00000449918 APOBEC3FQ8IUX4 373 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms