RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ANKIB1Q9P2G1 1089 aa23.51■■□□□ 1.35
RPS28-202ENST00000449223 GPSM2P81274 684 aa23.5■■□□□ 1.35
RPS28-202ENST00000449223 C8orf34Q49A92 452 aa23.5■■□□□ 1.35
RPS28-202ENST00000449223 CCDC102BQ68D86 513 aa23.5■■□□□ 1.35
RPS28-202ENST00000449223 DPEP1P16444 411 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 ATP2B4P23634 1241 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 GORABQ5T7V8 394 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 CC2D2BQ6DHV5 1058 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 SLC51AQ86UW1 340 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 KCNJ4P48050 445 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 TTLL6Q8N841 843 aa23.49■■□□□ 1.35
RPS28-202ENST00000449223 WTIPA6NIX2 430 aaPredicted RBP23.48■■□□□ 1.35
RPS28-202ENST00000449223 UQCRFS1P1P0C7P4 283 aa23.48■■□□□ 1.35
RPS28-202ENST00000449223 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
RPS28-202ENST00000449223 TICAM2Q86XR7 235 aa23.48■■□□□ 1.35
RPS28-202ENST00000449223 BOLA2Q9H3K6 86 aa23.48■■□□□ 1.35
RPS28-202ENST00000449223 GGA1Q9UJY5 639 aa23.48■■□□□ 1.35
RPS28-202ENST00000449223 NSFL1CQ9UNZ2 370 aaKnown RBP23.48■■□□□ 1.35
RPS28-202ENST00000449223 A0A0G2JLW4 131 aa23.47■■□□□ 1.35
RPS28-202ENST00000449223 PHKA1P46020 1223 aa23.47■■□□□ 1.35
RPS28-202ENST00000449223 GRIPAP1Q4V328 841 aa23.47■■□□□ 1.35
RPS28-202ENST00000449223 FBXO33Q7Z6M2 555 aa23.47■■□□□ 1.35
RPS28-202ENST00000449223 CNTROBQ8N137 903 aa23.47■■□□□ 1.35
RPS28-202ENST00000449223 MED23Q9ULK4 1368 aa23.47■■□□□ 1.35
RPS28-202ENST00000449223 CAVIN4Q5BKX8 364 aa23.46■■□□□ 1.35
RPS28-202ENST00000449223 TBC1D16Q8TBP0 767 aa23.46■■□□□ 1.35
RPS28-202ENST00000449223 EVI5LQ96CN4 794 aa23.46■■□□□ 1.35
RPS28-202ENST00000449223 FAM84BQ96KN1 310 aaPredicted RBP23.46■■□□□ 1.35
RPS28-202ENST00000449223 BACH2Q9BYV9 841 aa23.46■■□□□ 1.35
RPS28-202ENST00000449223 TMX4Q9H1E5 349 aaPredicted RBP23.46■■□□□ 1.35
RPS28-202ENST00000449223 MCAMP43121 646 aa23.45■■□□□ 1.34
RPS28-202ENST00000449223 RFX7Q2KHR2 1363 aa23.45■■□□□ 1.34
RPS28-202ENST00000449223 POLLQ9UGP5 575 aa23.45■■□□□ 1.34
RPS28-202ENST00000449223 MYH13Q9UKX3 1938 aa23.45■■□□□ 1.34
RPS28-202ENST00000449223 TRIM6-TRIM34B2RNG4 842 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 CDC45O75419 566 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 UFL1O94874 794 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 KLRK1P26718 216 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 BCAMP50895 628 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 MPNDQ8N594 471 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 RTFDC1Q9BY42 306 aaPredicted RBP23.44■■□□□ 1.34
RPS28-202ENST00000449223 PIM2Q9P1W9 311 aa23.44■■□□□ 1.34
RPS28-202ENST00000449223 PDS5AQ29RF7 1337 aaKnown RBP23.44■■□□□ 1.34
RPS28-202ENST00000449223 SEMA3EO15041 775 aa23.43■■□□□ 1.34
RPS28-202ENST00000449223 SCARF1Q14162 830 aa23.43■■□□□ 1.34
RPS28-202ENST00000449223 DOCK2Q92608 1830 aa23.43■■□□□ 1.34
RPS28-202ENST00000449223 DPP8Q6V1X1 898 aaPredicted RBP23.43■■□□□ 1.34
RPS28-202ENST00000449223 GNL3LQ9NVN8 582 aaKnown RBP23.43■■□□□ 1.34
RPS28-202ENST00000449223 HIBADHP31937 336 aaKnown RBP23.42■■□□□ 1.34
RPS28-202ENST00000449223 GYG1P46976 350 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 RASGRF1Q13972 1273 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 TXNRD3Q86VQ6 643 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 RILPL2Q969X0 211 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 PAG1Q9NWQ8 432 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 ARFGEF1Q9Y6D6 1849 aa23.42■■□□□ 1.34
RPS28-202ENST00000449223 SOCS7O14512 581 aa23.41■■□□□ 1.34
RPS28-202ENST00000449223 SOGA3Q5TF21 947 aa23.41■■□□□ 1.34
RPS28-202ENST00000449223 TBC1D9Q6ZT07 1266 aa23.41■■□□□ 1.34
RPS28-202ENST00000449223 HMG20BQ9P0W2 317 aa23.41■■□□□ 1.34
RPS28-202ENST00000449223 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
RPS28-202ENST00000449223 KBTBD3Q8NAB2 608 aa23.4■■□□□ 1.34
RPS28-202ENST00000449223 DNAJC2Q99543 621 aaKnown RBP23.4■■□□□ 1.34
RPS28-202ENST00000449223 MYH7P12883 1935 aa23.4■■□□□ 1.34
RPS28-202ENST00000449223 COL1A1P02452 1464 aaPredicted RBP23.39■■□□□ 1.34
RPS28-202ENST00000449223 ZNF804AQ7Z570 1209 aa23.39■■□□□ 1.34
RPS28-202ENST00000449223 VPS37DQ86XT2 251 aa23.39■■□□□ 1.34
RPS28-202ENST00000449223 SPATA5Q8NB90 893 aa23.39■■□□□ 1.34
RPS28-202ENST00000449223 ZAP70P43403 619 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 CCDC93Q567U6 631 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 DALRD3Q5D0E6 543 aaKnown RBP23.38■■□□□ 1.33
RPS28-202ENST00000449223 RTKN2Q8IZC4 609 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 FER1L6Q2WGJ9 1857 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 C6orf229H3BNL8 230 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 GOLIM4O00461 696 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 CYP2E1P05181 493 aaPredicted RBP23.38■■□□□ 1.33
RPS28-202ENST00000449223 IL1R1P14778 569 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 CHMLP26374 656 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 TTF1Q15361 905 aaPredicted RBP23.38■■□□□ 1.33
RPS28-202ENST00000449223 CASC1Q6TDU7 716 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 PI16Q6UXB8 463 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 EDC3Q96F86 508 aaKnown RBP23.38■■□□□ 1.33
RPS28-202ENST00000449223 PSMD1Q99460 953 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 EYA3Q99504 573 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 DENND2AQ9ULE3 1009 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 NDUFB9Q9Y6M9 179 aa23.38■■□□□ 1.33
RPS28-202ENST00000449223 HIP1O00291 1037 aa23.37■■□□□ 1.33
RPS28-202ENST00000449223 C21orf2O43822 256 aa23.37■■□□□ 1.33
RPS28-202ENST00000449223 FKBP4Q02790 459 aaKnown RBP eCLIP23.37■■□□□ 1.33
RPS28-202ENST00000449223 TDRD7Q8NHU6 1098 aaKnown RBP23.37■■□□□ 1.33
RPS28-202ENST00000449223 PPP1R1BQ9UD71 204 aaPredicted RBP23.37■■□□□ 1.33
RPS28-202ENST00000449223 GOLGB1Q14789 3259 aaKnown RBP23.36■■□□□ 1.33
RPS28-202ENST00000449223 EIF5BO60841 1220 aaKnown RBP23.36■■□□□ 1.33
RPS28-202ENST00000449223 SUPT20HQ8NEM7 779 aa23.36■■□□□ 1.33
RPS28-202ENST00000449223 FSD1Q9BTV5 496 aa23.36■■□□□ 1.33
RPS28-202ENST00000449223 MYO5AQ9Y4I1 1855 aaKnown RBP23.36■■□□□ 1.33
RPS28-202ENST00000449223 GPR101Q96P66 508 aaPredicted RBP23.35■■□□□ 1.33
RPS28-202ENST00000449223 COA1Q9GZY4 146 aa23.35■■□□□ 1.33
RPS28-202ENST00000449223 ANTXR1Q9H6X2 564 aa23.35■■□□□ 1.33
RPS28-202ENST00000449223 SNRKQ9NRH2 765 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms