RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 FBXW7Q969H0 707 aa24.9■■□□□ 1.58
VCP-203ENST00000448530 TLL2Q9Y6L7 1015 aa24.9■■□□□ 1.58
VCP-203ENST00000448530 PTPRCP08575 1304 aa24.89■■□□□ 1.58
VCP-203ENST00000448530 EGFRP00533 1210 aa24.89■■□□□ 1.58
VCP-203ENST00000448530 KRT26Q7Z3Y9 468 aa24.89■■□□□ 1.58
VCP-203ENST00000448530 POLR2AP24928 1970 aaKnown RBP24.89■■□□□ 1.57
VCP-203ENST00000448530 USP17L8P0C7I0 530 aa24.88■■□□□ 1.57
VCP-203ENST00000448530 GRM1Q13255 1194 aa24.88■■□□□ 1.57
VCP-203ENST00000448530 COL13A1Q5TAT6 717 aaPredicted RBP24.88■■□□□ 1.57
VCP-203ENST00000448530 CAPNS2Q96L46 248 aa24.88■■□□□ 1.57
VCP-203ENST00000448530 ZNF280AP59817 542 aaPredicted RBP24.87■■□□□ 1.57
VCP-203ENST00000448530 EPHA10Q5JZY3 1008 aa24.87■■□□□ 1.57
VCP-203ENST00000448530 SSH1Q8WYL5 1049 aa24.87■■□□□ 1.57
VCP-203ENST00000448530 LDHAL6AQ6ZMR3 332 aa24.86■■□□□ 1.57
VCP-203ENST00000448530 TXNRD3Q86VQ6 643 aa24.86■■□□□ 1.57
VCP-203ENST00000448530 SULF1Q8IWU6 871 aa24.86■■□□□ 1.57
VCP-203ENST00000448530 CDCA7LQ96GN5 454 aa24.86■■□□□ 1.57
VCP-203ENST00000448530 GMLQ99445 158 aa24.86■■□□□ 1.57
VCP-203ENST00000448530 MYO3BQ8WXR4 1341 aa24.86■■□□□ 1.57
VCP-203ENST00000448530 MAP2K1Q02750 393 aaPredicted RBP24.85■■□□□ 1.57
VCP-203ENST00000448530 STRIP1Q5VSL9 837 aa24.85■■□□□ 1.57
VCP-203ENST00000448530 CYP4F22Q6NT55 531 aa24.85■■□□□ 1.57
VCP-203ENST00000448530 SAPCD2Q86UD0 394 aa24.85■■□□□ 1.57
VCP-203ENST00000448530 OGFOD1Q8N543 542 aa24.85■■□□□ 1.57
VCP-203ENST00000448530 HELBQ8NG08 1087 aaPredicted RBP24.85■■□□□ 1.57
VCP-203ENST00000448530 CNNM1Q9NRU3 951 aa24.85■■□□□ 1.57
VCP-203ENST00000448530 GGA3Q9NZ52 723 aa24.85■■□□□ 1.57
VCP-203ENST00000448530 TAF5LO75529 589 aa24.84■■□□□ 1.57
VCP-203ENST00000448530 ALDH1L2Q3SY69 923 aa24.84■■□□□ 1.57
VCP-203ENST00000448530 DACT2Q5SW24 774 aa24.84■■□□□ 1.57
VCP-203ENST00000448530 MYOZ2Q9NPC6 264 aa24.84■■□□□ 1.57
VCP-203ENST00000448530 FOXN1O15353 648 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 KLRK1P26718 216 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 SCARF1Q14162 830 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 TTLL5Q6EMB2 1281 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 SUCLG2Q96I99 432 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 ZNF594Q96JF6 807 aaPredicted RBP24.83■■□□□ 1.57
VCP-203ENST00000448530 SMC4Q9NTJ3 1288 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 WBP1LQ9NX94 342 aa24.83■■□□□ 1.57
VCP-203ENST00000448530 ADM5C9JUS6 153 aa24.82■■□□□ 1.56
VCP-203ENST00000448530 PLIN1O60240 522 aa24.82■■□□□ 1.56
VCP-203ENST00000448530 NBPF7P0C2Y1 421 aaPredicted RBP24.82■■□□□ 1.56
VCP-203ENST00000448530 TNS4Q8IZW8 715 aa24.82■■□□□ 1.56
VCP-203ENST00000448530 HHIPL1Q96JK4 782 aa24.82■■□□□ 1.56
VCP-203ENST00000448530 A0A1B0GUL6 1792 aa24.82■■□□□ 1.56
VCP-203ENST00000448530 CTCFP49711 727 aaPredicted RBP24.81■■□□□ 1.56
VCP-203ENST00000448530 ANGEL2Q5VTE6 544 aaKnown RBP24.81■■□□□ 1.56
VCP-203ENST00000448530 ZNF804AQ7Z570 1209 aa24.81■■□□□ 1.56
VCP-203ENST00000448530 BEGAINQ9BUH8 593 aa24.81■■□□□ 1.56
VCP-203ENST00000448530 MXD3Q9BW11 206 aa24.81■■□□□ 1.56
VCP-203ENST00000448530 UTYO14607 1347 aa24.81■■□□□ 1.56
VCP-203ENST00000448530 CT47B1P0C2W7 299 aaPredicted RBP24.8■■□□□ 1.56
VCP-203ENST00000448530 GTF2IP78347 998 aa24.8■■□□□ 1.56
VCP-203ENST00000448530 DLK2Q6UY11 383 aa24.8■■□□□ 1.56
VCP-203ENST00000448530 TRMT2AQ8IZ69 625 aaKnown RBP24.8■■□□□ 1.56
VCP-203ENST00000448530 C2orf69Q8N8R5 385 aa24.8■■□□□ 1.56
VCP-203ENST00000448530 CD209Q9NNX6 404 aa24.8■■□□□ 1.56
VCP-203ENST00000448530 ASTN2O75129 1339 aaPredicted RBP24.8■■□□□ 1.56
VCP-203ENST00000448530 SNAP23O00161 211 aa24.79■■□□□ 1.56
VCP-203ENST00000448530 MMP14P50281 582 aa24.79■■□□□ 1.56
VCP-203ENST00000448530 HUNKP57058 714 aa24.79■■□□□ 1.56
VCP-203ENST00000448530 C15orf52Q6ZUT6 534 aaKnown RBP24.79■■□□□ 1.56
VCP-203ENST00000448530 GBA2Q9HCG7 927 aaPredicted RBP24.79■■□□□ 1.56
VCP-203ENST00000448530 HDAC9Q9UKV0 1011 aa24.79■■□□□ 1.56
VCP-203ENST00000448530 ZNF646O15015 1829 aaPredicted RBP24.78■■□□□ 1.56
VCP-203ENST00000448530 MAP2K2P36507 400 aa24.78■■□□□ 1.56
VCP-203ENST00000448530 KAZALD1Q96I82 304 aa24.78■■□□□ 1.56
VCP-203ENST00000448530 BICC1Q9H694 974 aaKnown RBP24.78■■□□□ 1.56
VCP-203ENST00000448530 THSD7BQ9C0I4 1608 aa24.78■■□□□ 1.56
VCP-203ENST00000448530 PITPNM2Q9BZ72 1349 aa24.77■■□□□ 1.56
VCP-203ENST00000448530 AOC2O75106 756 aa24.76■■□□□ 1.55
VCP-203ENST00000448530 KIAA0825Q8IV33 1275 aa24.76■■□□□ 1.55
VCP-203ENST00000448530 CDCA5Q96FF9 252 aa24.76■■□□□ 1.55
VCP-203ENST00000448530 PRDM10Q9NQV6 1147 aa24.75■■□□□ 1.55
VCP-203ENST00000448530 NBPF9Q3BBW0 867 aa24.74■■□□□ 1.55
VCP-203ENST00000448530 RABL6Q3YEC7 729 aaPredicted RBP24.74■■□□□ 1.55
VCP-203ENST00000448530 USP44Q9H0E7 712 aa24.74■■□□□ 1.55
VCP-203ENST00000448530 MROH5Q6ZUA9 1318 aa24.74■■□□□ 1.55
VCP-203ENST00000448530 IRS2Q9Y4H2 1338 aa24.74■■□□□ 1.55
VCP-203ENST00000448530 IL1R1P14778 569 aa24.73■■□□□ 1.55
VCP-203ENST00000448530 LBX1P52954 281 aa24.73■■□□□ 1.55
VCP-203ENST00000448530 UBE4AQ14139 1066 aa24.73■■□□□ 1.55
VCP-203ENST00000448530 PUS3Q9BZE2 481 aaKnown RBP24.73■■□□□ 1.55
VCP-203ENST00000448530 WNT10BO00744 389 aa24.72■■□□□ 1.55
VCP-203ENST00000448530 NOGQ13253 232 aa24.72■■□□□ 1.55
VCP-203ENST00000448530 RGMBQ6NW40 437 aa24.72■■□□□ 1.55
VCP-203ENST00000448530 ANKRD44Q8N8A2 993 aa24.72■■□□□ 1.55
VCP-203ENST00000448530 API5Q9BZZ5 524 aaKnown RBP24.72■■□□□ 1.55
VCP-203ENST00000448530 SASH1O94885 1247 aa24.71■■□□□ 1.55
VCP-203ENST00000448530 NOB1Q9ULX3 412 aaKnown RBP24.71■■□□□ 1.55
VCP-203ENST00000448530 RIPOR2Q9Y4F9 1068 aa24.71■■□□□ 1.55
VCP-203ENST00000448530 HSPA8P11142 646 aaKnown RBP24.7■■□□□ 1.54
VCP-203ENST00000448530 METTL24Q5JXM2 366 aa24.7■■□□□ 1.54
VCP-203ENST00000448530 CCDC102AQ96A19 550 aa24.7■■□□□ 1.54
VCP-203ENST00000448530 HIBADHP31937 336 aaKnown RBP24.69■■□□□ 1.54
VCP-203ENST00000448530 ZNF157P51786 506 aaPredicted RBP24.69■■□□□ 1.54
VCP-203ENST00000448530 BRPF1P55201 1214 aaPredicted RBP24.69■■□□□ 1.54
VCP-203ENST00000448530 DLGAP5Q15398 846 aa24.69■■□□□ 1.54
VCP-203ENST00000448530 NF2P35240 595 aa24.68■■□□□ 1.54
VCP-203ENST00000448530 FKBP1AP62942 108 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms