RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ATP2B4P23634 1241 aa23.85■■□□□ 1.41
SGCE-207ENST00000447873 BMP2KLQ5H9B9 411 aa23.85■■□□□ 1.41
SGCE-207ENST00000447873 TTC39AQ5SRH9 613 aa23.85■■□□□ 1.41
SGCE-207ENST00000447873 OLFM4Q6UX06 510 aa23.85■■□□□ 1.41
SGCE-207ENST00000447873 BRCA1P38398 1863 aaKnown RBP23.84■■□□□ 1.41
SGCE-207ENST00000447873 GSPT1P15170 499 aaKnown RBP23.84■■□□□ 1.41
SGCE-207ENST00000447873 ATP5JP18859 108 aa23.84■■□□□ 1.41
SGCE-207ENST00000447873 MPNDQ8N594 471 aa23.84■■□□□ 1.41
SGCE-207ENST00000447873 LTBP1Q14766 1721 aa23.84■■□□□ 1.41
SGCE-207ENST00000447873 CCDC102BQ68D86 513 aa23.83■■□□□ 1.41
SGCE-207ENST00000447873 CC2D2BQ6DHV5 1058 aa23.83■■□□□ 1.41
SGCE-207ENST00000447873 DPP8Q6V1X1 898 aaPredicted RBP23.83■■□□□ 1.41
SGCE-207ENST00000447873 C7orf43Q8WVR3 580 aa23.83■■□□□ 1.41
SGCE-207ENST00000447873 BOLA2Q9H3K6 86 aa23.83■■□□□ 1.41
SGCE-207ENST00000447873 CAVIN4Q5BKX8 364 aa23.82■■□□□ 1.4
SGCE-207ENST00000447873 TBC1D16Q8TBP0 767 aa23.82■■□□□ 1.4
SGCE-207ENST00000447873 C6orf229H3BNL8 230 aa23.82■■□□□ 1.4
SGCE-207ENST00000447873 C21orf2O43822 256 aa23.82■■□□□ 1.4
SGCE-207ENST00000447873 DALRD3Q5D0E6 543 aaKnown RBP23.82■■□□□ 1.4
SGCE-207ENST00000447873 VPS37DQ86XT2 251 aa23.82■■□□□ 1.4
SGCE-207ENST00000447873 KLRK1P26718 216 aa23.81■■□□□ 1.4
SGCE-207ENST00000447873 PHKA1P46020 1223 aa23.81■■□□□ 1.4
SGCE-207ENST00000447873 GYG1P46976 350 aa23.81■■□□□ 1.4
SGCE-207ENST00000447873 BCAMP50895 628 aa23.81■■□□□ 1.4
SGCE-207ENST00000447873 POLLQ9UGP5 575 aa23.81■■□□□ 1.4
SGCE-207ENST00000447873 TRIM6-TRIM34B2RNG4 842 aa23.8■■□□□ 1.4
SGCE-207ENST00000447873 UQCRFS1P1P0C7P4 283 aa23.8■■□□□ 1.4
SGCE-207ENST00000447873 NLGN2Q8NFZ4 835 aa23.8■■□□□ 1.4
SGCE-207ENST00000447873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.8■■□□□ 1.4
SGCE-207ENST00000447873 FHDC1Q9C0D6 1143 aaPredicted RBP23.8■■□□□ 1.4
SGCE-207ENST00000447873 WWC3Q9ULE0 1092 aa23.8■■□□□ 1.4
SGCE-207ENST00000447873 AK9Q5TCS8 1911 aa23.8■■□□□ 1.4
SGCE-207ENST00000447873 MAP4K4O95819 1239 aaPredicted RBP23.79■■□□□ 1.4
SGCE-207ENST00000447873 ZNF512BQ96KM6 892 aaPredicted RBP23.79■■□□□ 1.4
SGCE-207ENST00000447873 FAM84BQ96KN1 310 aaPredicted RBP23.79■■□□□ 1.4
SGCE-207ENST00000447873 GNL3LQ9NVN8 582 aaKnown RBP23.79■■□□□ 1.4
SGCE-207ENST00000447873 SDSP20132 328 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 GRIPAP1Q4V328 841 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 C15orf52Q6ZUT6 534 aaKnown RBP23.78■■□□□ 1.4
SGCE-207ENST00000447873 RILPL2Q969X0 211 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 GPR101Q96P66 508 aaPredicted RBP23.78■■□□□ 1.4
SGCE-207ENST00000447873 HAUS7Q99871 368 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 ARID4AP29374 1257 aaPredicted RBP23.78■■□□□ 1.4
SGCE-207ENST00000447873 HIBADHP31937 336 aaKnown RBP23.78■■□□□ 1.4
SGCE-207ENST00000447873 CCDC93Q567U6 631 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 SOGA3Q5TF21 947 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 TXNRD3Q86VQ6 643 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 DUOX1Q9NRD9 1551 aa23.78■■□□□ 1.4
SGCE-207ENST00000447873 IRS2Q9Y4H2 1338 aa23.77■■□□□ 1.4
SGCE-207ENST00000447873 FBXO33Q7Z6M2 555 aa23.77■■□□□ 1.4
SGCE-207ENST00000447873 CNTROBQ8N137 903 aa23.77■■□□□ 1.4
SGCE-207ENST00000447873 DNAJC2Q99543 621 aaKnown RBP23.77■■□□□ 1.4
SGCE-207ENST00000447873 FKBP4Q02790 459 aaKnown RBP eCLIP23.76■■□□□ 1.39
SGCE-207ENST00000447873 RTKN2Q8IZC4 609 aa23.76■■□□□ 1.39
SGCE-207ENST00000447873 EYA3Q99504 573 aa23.76■■□□□ 1.39
SGCE-207ENST00000447873 BCS1LQ9Y276 419 aa23.76■■□□□ 1.39
SGCE-207ENST00000447873 AKAP11Q9UKA4 1901 aa23.76■■□□□ 1.39
SGCE-207ENST00000447873 MED23Q9ULK4 1368 aa23.76■■□□□ 1.39
SGCE-207ENST00000447873 MCAMP43121 646 aa23.75■■□□□ 1.39
SGCE-207ENST00000447873 SCARF1Q14162 830 aa23.75■■□□□ 1.39
SGCE-207ENST00000447873 ZNF804AQ7Z570 1209 aa23.75■■□□□ 1.39
SGCE-207ENST00000447873 ZC3H12CQ9C0D7 883 aaKnown RBP23.75■■□□□ 1.39
SGCE-207ENST00000447873 SNRKQ9NRH2 765 aa23.75■■□□□ 1.39
SGCE-207ENST00000447873 NDUFB9Q9Y6M9 179 aa23.75■■□□□ 1.39
SGCE-207ENST00000447873 WASHC4Q2M389 1173 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 EVI5LQ96CN4 794 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 SNED1Q8TER0 1413 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 MYH13Q9UKX3 1938 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 FRAT2O75474 233 aaPredicted RBP23.74■■□□□ 1.39
SGCE-207ENST00000447873 RASGRF1Q13972 1273 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 SPATA5Q8NB90 893 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 SUPT20HQ8NEM7 779 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 SYT17Q9BSW7 474 aa23.74■■□□□ 1.39
SGCE-207ENST00000447873 RTFDC1Q9BY42 306 aaPredicted RBP23.74■■□□□ 1.39
SGCE-207ENST00000447873 IQSEC3Q9UPP2 1182 aaPredicted RBP23.74■■□□□ 1.39
SGCE-207ENST00000447873 GOLIM4O00461 696 aa23.73■■□□□ 1.39
SGCE-207ENST00000447873 RIMBP2O15034 1052 aa23.73■■□□□ 1.39
SGCE-207ENST00000447873 PI16Q6UXB8 463 aa23.73■■□□□ 1.39
SGCE-207ENST00000447873 PAG1Q9NWQ8 432 aa23.73■■□□□ 1.39
SGCE-207ENST00000447873 HMG20BQ9P0W2 317 aa23.73■■□□□ 1.39
SGCE-207ENST00000447873 SEMA3EO15041 775 aa23.72■■□□□ 1.39
SGCE-207ENST00000447873 ZAP70P43403 619 aa23.72■■□□□ 1.39
SGCE-207ENST00000447873 EDC3Q96F86 508 aaKnown RBP23.72■■□□□ 1.39
SGCE-207ENST00000447873 ARFGEF1Q9Y6D6 1849 aa23.71■■□□□ 1.39
SGCE-207ENST00000447873 DENND2AQ9ULE3 1009 aa23.71■■□□□ 1.39
SGCE-207ENST00000447873 GOLGB1Q14789 3259 aaKnown RBP23.7■■□□□ 1.39
SGCE-207ENST00000447873 CDC45O75419 566 aa23.7■■□□□ 1.38
SGCE-207ENST00000447873 PSMD1Q99460 953 aa23.7■■□□□ 1.38
SGCE-207ENST00000447873 FSD1Q9BTV5 496 aa23.7■■□□□ 1.38
SGCE-207ENST00000447873 G3V3G9 751 aa23.69■■□□□ 1.38
SGCE-207ENST00000447873 DCAF8Q5TAQ9 597 aa23.69■■□□□ 1.38
SGCE-207ENST00000447873 CD209Q9NNX6 404 aa23.69■■□□□ 1.38
SGCE-207ENST00000447873 TTF1Q15361 905 aaPredicted RBP23.69■■□□□ 1.38
SGCE-207ENST00000447873 COA1Q9GZY4 146 aa23.69■■□□□ 1.38
SGCE-207ENST00000447873 ANTXR1Q9H6X2 564 aa23.69■■□□□ 1.38
SGCE-207ENST00000447873 FER1L6Q2WGJ9 1857 aa23.68■■□□□ 1.38
SGCE-207ENST00000447873 CYP2E1P05181 493 aaPredicted RBP23.68■■□□□ 1.38
SGCE-207ENST00000447873 IL1R1P14778 569 aa23.68■■□□□ 1.38
SGCE-207ENST00000447873 C8orf34Q49A92 452 aa23.68■■□□□ 1.38
SGCE-207ENST00000447873 CASC1Q6TDU7 716 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms