RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 TEX13AQ9BXU3 409 aaPredicted RBP7.84□□□□□ -1.15
HMGN1P36-201ENST00000446623 TAF1DQ9H5J8 278 aaPredicted RBP7.84□□□□□ -1.15
HMGN1P36-201ENST00000446623 PRDM10Q9NQV6 1147 aa7.84□□□□□ -1.15
HMGN1P36-201ENST00000446623 ADAMTSL1Q8N6G6 1762 aa7.84□□□□□ -1.15
HMGN1P36-201ENST00000446623 NPHP1O15259 732 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 CAMTA2O94983 1202 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 A1BGP04217 495 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 CTCFP49711 727 aaPredicted RBP7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 VEGFBP49765 207 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 ST5P78524 1137 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 TRIM26Q12899 539 aaPredicted RBP7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 AIDAQ96BJ3 306 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
HMGN1P36-201ENST00000446623 ZNF541Q9H0D2 1346 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 CLSPNQ9HAW4 1339 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 COL3A1P02461 1466 aaPredicted RBP7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 TMEM88BA6NKF7 163 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 GNAT3A8MTJ3 354 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 EAPPQ56P03 285 aaPredicted RBP7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 ZNF697Q5TEC3 545 aa7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
HMGN1P36-201ENST00000446623 KLRG2A4D1S0 409 aaPredicted RBP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 NPR1P16066 1061 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 PIP4K2AP48426 406 aaPredicted RBP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 MMP16P51512 607 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 LBX1P52954 281 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 FKBP4Q02790 459 aaKnown RBP eCLIP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 OLFM4Q6UX06 510 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 Q6ZNB5 142 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 ZNF598Q86UK7 904 aaKnown RBP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 NBPF5PQ86XG9 351 aaPredicted RBP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 DZIP3Q86Y13 1208 aaKnown RBP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 GAS2L2Q8NHY3 880 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 ZNF277Q9NRM2 450 aaPredicted RBP7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 HACL1Q9UJ83 578 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 PCDHB15Q9Y5E8 787 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 CEMIPQ8WUJ3 1361 aa7.81□□□□□ -1.16
HMGN1P36-201ENST00000446623 KIF7Q2M1P5 1343 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 BTBD11A6QL63 1104 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 U2SURPO15042 1029 aaKnown RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 PER1O15534 1290 aaPredicted RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 KCNQ3O43525 872 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 DXOO77932 396 aaKnown RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 EPHX2P34913 555 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 MAP1SQ66K74 1059 aaPredicted RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 RSBN1LQ6PCB5 846 aaPredicted RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 CLEC4GQ6UXB4 293 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 PNMA8AQ86V59 439 aaPredicted RBP7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 RETREG3Q86VR2 466 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 USP16Q9Y5T5 823 aa7.8□□□□□ -1.16
HMGN1P36-201ENST00000446623 RNF123Q5XPI4 1314 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 THSD7BQ9C0I4 1608 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 PRAMEF22A3QJZ6 481 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 FZD9O00144 591 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 TNFRSF10AO00220 468 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 HSPA8P11142 646 aaKnown RBP7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 FOXC1Q12948 553 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 DIXDC1Q155Q3 683 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 DEFB115Q30KQ5 88 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 TPTE2Q6XPS3 522 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 TRIM67Q6ZTA4 783 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 RIC3Q7Z5B4 369 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 RTKN2Q8IZC4 609 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 CNTROBQ8N137 903 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 ABHD8Q96I13 439 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 PHACTR3Q96KR7 559 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 PCGF6Q9BYE7 350 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
HMGN1P36-201ENST00000446623 SNED1Q8TER0 1413 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 PDE4DIPQ5VU43 2346 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 JUNDP17535 347 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 IARSP41252 1262 aaKnown RBP7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 MAP2K1Q02750 393 aaPredicted RBP7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 MTMR2Q13614 643 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 MYSM1Q5VVJ2 828 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 GPC2Q8N158 579 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 SYNE4Q8N205 404 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 PRR7Q8TB68 274 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 KDM4CQ9H3R0 1056 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 ABT1Q9ULW3 272 aaKnown RBP7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 NIP7Q9Y221 180 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 COL4A5P29400 1685 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 LTBP1Q14766 1721 aa7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 WDR33Q9C0J8 1336 aaKnown RBP7.78□□□□□ -1.16
HMGN1P36-201ENST00000446623 FAM177BA6PVY3 158 aa7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 SPTLC1O15269 473 aa7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 SNRPA1P09661 255 aaKnown RBP7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 ALDH1B1P30837 517 aa7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 PRKAR2BP31323 418 aa7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 RPIAP49247 311 aa7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 PSMD1Q99460 953 aa7.77□□□□□ -1.17
HMGN1P36-201ENST00000446623 DDX21Q9NR30 783 aaKnown RBP eCLIP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms