RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 RGMBQ6NW40 437 aa13.98□□□□□ -0.17
HLA-F-221ENST00000444621 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
HLA-F-221ENST00000444621 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
HLA-F-221ENST00000444621 ANKRD2Q9GZV1 360 aa13.98□□□□□ -0.17
HLA-F-221ENST00000444621 GREM2Q9H772 168 aa13.98□□□□□ -0.17
HLA-F-221ENST00000444621 SAGE1Q9NXZ1 904 aa13.98□□□□□ -0.17
HLA-F-221ENST00000444621 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
HLA-F-221ENST00000444621 CNOT7Q9UIV1 285 aaKnown RBP13.98□□□□□ -0.17
HLA-F-221ENST00000444621 TRPA1O75762 1119 aa13.97□□□□□ -0.17
HLA-F-221ENST00000444621 ITGA6P23229 1130 aa13.97□□□□□ -0.17
HLA-F-221ENST00000444621 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
HLA-F-221ENST00000444621 CCDC57Q2TAC2 916 aa13.97□□□□□ -0.17
HLA-F-221ENST00000444621 TBC1D16Q8TBP0 767 aa13.97□□□□□ -0.17
HLA-F-221ENST00000444621 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
HLA-F-221ENST00000444621 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
HLA-F-221ENST00000444621 LRRC37AA6NMS7 1700 aa13.96□□□□□ -0.17
HLA-F-221ENST00000444621 CSF1RP07333 972 aa13.96□□□□□ -0.17
HLA-F-221ENST00000444621 KCNJ4P48050 445 aa13.96□□□□□ -0.17
HLA-F-221ENST00000444621 POLLQ9UGP5 575 aa13.96□□□□□ -0.17
HLA-F-221ENST00000444621 H7C1D1 291 aa13.95□□□□□ -0.18
HLA-F-221ENST00000444621 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
HLA-F-221ENST00000444621 CCDC102AQ96A19 550 aa13.95□□□□□ -0.18
HLA-F-221ENST00000444621 API5Q9BZZ5 524 aaKnown RBP13.95□□□□□ -0.18
HLA-F-221ENST00000444621 YDJCA8MPS7 323 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
HLA-F-221ENST00000444621 ECE2O60344 883 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
HLA-F-221ENST00000444621 ZNF157P51786 506 aaPredicted RBP13.94□□□□□ -0.18
HLA-F-221ENST00000444621 CASP7P55210 303 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 DOK7Q18PE1 504 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 SAMD7Q7Z3H4 446 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 CTU1Q7Z7A3 348 aaKnown RBP13.94□□□□□ -0.18
HLA-F-221ENST00000444621 C2orf69Q8N8R5 385 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 DBNDD1Q9H9R9 158 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 GBA2Q9HCG7 927 aaPredicted RBP13.94□□□□□ -0.18
HLA-F-221ENST00000444621 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 LEMD3Q9Y2U8 911 aa13.94□□□□□ -0.18
HLA-F-221ENST00000444621 KRT26Q7Z3Y9 468 aa13.93□□□□□ -0.18
HLA-F-221ENST00000444621 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
HLA-F-221ENST00000444621 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
HLA-F-221ENST00000444621 KIF16BQ96L93 1317 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 RPS12P25398 132 aaKnown RBP13.92□□□□□ -0.18
HLA-F-221ENST00000444621 FOXO4P98177 505 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 TBC1D10BQ4KMP7 808 aaPredicted RBP13.92□□□□□ -0.18
HLA-F-221ENST00000444621 LDHAL6AQ6ZMR3 332 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 PODNQ7Z5L7 613 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 CSRNP1Q96S65 589 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
HLA-F-221ENST00000444621 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
HLA-F-221ENST00000444621 EGFRP00533 1210 aa13.91□□□□□ -0.18
HLA-F-221ENST00000444621 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
HLA-F-221ENST00000444621 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
HLA-F-221ENST00000444621 DPF2Q92785 391 aa13.91□□□□□ -0.18
HLA-F-221ENST00000444621 DUOX1Q9NRD9 1551 aa13.91□□□□□ -0.18
HLA-F-221ENST00000444621 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
HLA-F-221ENST00000444621 PSMD14O00487 310 aa13.9□□□□□ -0.18
HLA-F-221ENST00000444621 SLC10A3P09131 477 aa13.9□□□□□ -0.18
HLA-F-221ENST00000444621 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
HLA-F-221ENST00000444621 CHRNDQ07001 517 aa13.9□□□□□ -0.18
HLA-F-221ENST00000444621 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
HLA-F-221ENST00000444621 DCPSQ96C86 337 aaKnown RBP13.9□□□□□ -0.18
HLA-F-221ENST00000444621 UTYO14607 1347 aa13.9□□□□□ -0.19
HLA-F-221ENST00000444621 MED23Q9ULK4 1368 aa13.89□□□□□ -0.19
HLA-F-221ENST00000444621 NBPF7P0C2Y1 421 aaPredicted RBP13.89□□□□□ -0.19
HLA-F-221ENST00000444621 FBXW7Q969H0 707 aa13.89□□□□□ -0.19
HLA-F-221ENST00000444621 COA1Q9GZY4 146 aa13.89□□□□□ -0.19
HLA-F-221ENST00000444621 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
HLA-F-221ENST00000444621 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
HLA-F-221ENST00000444621 PLIN1O60240 522 aa13.88□□□□□ -0.19
HLA-F-221ENST00000444621 UBTFL1P0CB47 393 aaPredicted RBP13.88□□□□□ -0.19
HLA-F-221ENST00000444621 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
HLA-F-221ENST00000444621 AGBL3Q8NEM8 1001 aa13.88□□□□□ -0.19
HLA-F-221ENST00000444621 FRAT1Q92837 279 aaPredicted RBP13.88□□□□□ -0.19
HLA-F-221ENST00000444621 SUCLG2Q96I99 432 aa13.88□□□□□ -0.19
HLA-F-221ENST00000444621 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
HLA-F-221ENST00000444621 EPHA10Q5JZY3 1008 aa13.87□□□□□ -0.19
HLA-F-221ENST00000444621 ZNF804AQ7Z570 1209 aa13.87□□□□□ -0.19
HLA-F-221ENST00000444621 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
HLA-F-221ENST00000444621 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
HLA-F-221ENST00000444621 BICC1Q9H694 974 aaKnown RBP13.87□□□□□ -0.19
HLA-F-221ENST00000444621 ZBED9Q6R2W3 1325 aa13.87□□□□□ -0.19
HLA-F-221ENST00000444621 MROH5Q6ZUA9 1318 aa13.87□□□□□ -0.19
HLA-F-221ENST00000444621 COL4A1P02462 1669 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 TAF5LO75529 589 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 MMP14P50281 582 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 PKN2Q16513 984 aaKnown RBP13.86□□□□□ -0.19
HLA-F-221ENST00000444621 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
HLA-F-221ENST00000444621 SULF1Q8IWU6 871 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
HLA-F-221ENST00000444621 OGFOD1Q8N543 542 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 GCC1Q96CN9 775 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 CDCA5Q96FF9 252 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 ZNF594Q96JF6 807 aaPredicted RBP13.86□□□□□ -0.19
HLA-F-221ENST00000444621 KCNQ5Q9NR82 932 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
HLA-F-221ENST00000444621 GNAI3P08754 354 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms