RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 ECM2O94769 699 aaPredicted RBP19.12■□□□□ 0.65
SYNCRIP-203ENST00000444272 GJB1P08034 283 aa19.12■□□□□ 0.65
SYNCRIP-203ENST00000444272 GIGYF2Q6Y7W6 1299 aaKnown RBP19.12■□□□□ 0.65
SYNCRIP-203ENST00000444272 SYMPKQ92797 1274 aaKnown RBP19.12■□□□□ 0.65
SYNCRIP-203ENST00000444272 ZC3H12CQ9C0D7 883 aaKnown RBP19.12■□□□□ 0.65
SYNCRIP-203ENST00000444272 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
SYNCRIP-203ENST00000444272 GJA5P36382 358 aa19.11■□□□□ 0.65
SYNCRIP-203ENST00000444272 TDHQ8IZJ6 230 aa19.11■□□□□ 0.65
SYNCRIP-203ENST00000444272 TBC1D16Q8TBP0 767 aa19.11■□□□□ 0.65
SYNCRIP-203ENST00000444272 TMEM265A0A087WTH1 108 aa19.1■□□□□ 0.65
SYNCRIP-203ENST00000444272 WNT10BO00744 389 aa19.1■□□□□ 0.65
SYNCRIP-203ENST00000444272 CCL5P13501 91 aa19.1■□□□□ 0.65
SYNCRIP-203ENST00000444272 MYL6BP14649 208 aa19.1■□□□□ 0.65
SYNCRIP-203ENST00000444272 TAF1CQ15572 869 aaPredicted RBP19.1■□□□□ 0.65
SYNCRIP-203ENST00000444272 RNF208Q9H0X6 261 aa19.1■□□□□ 0.65
SYNCRIP-203ENST00000444272 TESPA1A2RU30 521 aaPredicted RBP19.09■□□□□ 0.65
SYNCRIP-203ENST00000444272 FAM161BQ96MY7 647 aa19.09■□□□□ 0.65
SYNCRIP-203ENST00000444272 ZFYVE28Q9HCC9 887 aa19.09■□□□□ 0.65
SYNCRIP-203ENST00000444272 CDH23Q9H251 3354 aa19.09■□□□□ 0.65
SYNCRIP-203ENST00000444272 SASH1O94885 1247 aa19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 KIF22Q14807 665 aa19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 MAP3K11Q16584 847 aa19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 U2AF1L4Q8WU68 220 aaKnown RBP19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 CELF1Q92879 486 aaKnown RBP19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 ZMYND8Q9ULU4 1186 aaPredicted RBP19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 COL4A1P02462 1669 aa19.08■□□□□ 0.64
SYNCRIP-203ENST00000444272 TNFRSF10AO00220 468 aa19.07■□□□□ 0.64
SYNCRIP-203ENST00000444272 DIAPH1O60610 1272 aaKnown RBP19.07■□□□□ 0.64
SYNCRIP-203ENST00000444272 SSC5DA1L4H1 1573 aa19.06■□□□□ 0.64
SYNCRIP-203ENST00000444272 PRMT2P55345 433 aa19.06■□□□□ 0.64
SYNCRIP-203ENST00000444272 LACTBP83111 547 aaPredicted RBP19.06■□□□□ 0.64
SYNCRIP-203ENST00000444272 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
SYNCRIP-203ENST00000444272 PANK3Q9H999 370 aa19.06■□□□□ 0.64
SYNCRIP-203ENST00000444272 PPP1R12BO60237 982 aaPredicted RBP19.05■□□□□ 0.64
SYNCRIP-203ENST00000444272 GNRH1P01148 92 aa19.04■□□□□ 0.64
SYNCRIP-203ENST00000444272 GRK4P32298 578 aa19.04■□□□□ 0.64
SYNCRIP-203ENST00000444272 C7orf61Q8IZ16 206 aa19.04■□□□□ 0.64
SYNCRIP-203ENST00000444272 MAFAQ8NHW3 353 aaPredicted RBP19.04■□□□□ 0.64
SYNCRIP-203ENST00000444272 USP17L3A6NCW0 530 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 USP17L4A6NCW7 530 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 POTEB2H3BUK9 544 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 UFL1O94874 794 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 MAGEA10P43363 369 aaPredicted RBP19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 MAP3K12Q12852 859 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 USP17L1Q7RTZ2 530 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 OGFOD1Q8N543 542 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 BIN2Q9UBW5 565 aaPredicted RBP19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 RIPOR2Q9Y4F9 1068 aa19.03■□□□□ 0.64
SYNCRIP-203ENST00000444272 FAM109BQ6ICB4 259 aaPredicted RBP19.02■□□□□ 0.64
SYNCRIP-203ENST00000444272 MS4A4AQ96JQ5 239 aa19.02■□□□□ 0.64
SYNCRIP-203ENST00000444272 COL1A1P02452 1464 aaPredicted RBP19.02■□□□□ 0.63
SYNCRIP-203ENST00000444272 SGPL1O95470 568 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 SYN1P17600 705 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 MCM10Q7L590 875 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 RAET1EQ8TD07 263 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 BRI3BPQ8WY22 251 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 MXD3Q9BW11 206 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 UBE2OQ9C0C9 1292 aaKnown RBP19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 TRMT112Q9UI30 125 aaKnown RBP19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 OTOFQ9HC10 1997 aa19.01■□□□□ 0.63
SYNCRIP-203ENST00000444272 UNCXA6NJT0 531 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 UBXN2AP68543 259 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 FAM43AQ8N2R8 423 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 SNX27Q96L92 541 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 DEFB129Q9H1M3 183 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 SRRDQ9UH36 339 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 SH3TC1Q8TE82 1336 aa19■□□□□ 0.63
SYNCRIP-203ENST00000444272 CCL15-CCL14A0A0B4J2E2 113 aa18.99■□□□□ 0.63
SYNCRIP-203ENST00000444272 CCL15Q16663 113 aa18.99■□□□□ 0.63
SYNCRIP-203ENST00000444272 NLRP10Q86W26 655 aa18.99■□□□□ 0.63
SYNCRIP-203ENST00000444272 OPTNQ96CV9 577 aa18.99■□□□□ 0.63
SYNCRIP-203ENST00000444272 TRIM47Q96LD4 638 aa18.99■□□□□ 0.63
SYNCRIP-203ENST00000444272 UNC93B1Q9H1C4 597 aa18.99■□□□□ 0.63
SYNCRIP-203ENST00000444272 U2SURPO15042 1029 aaKnown RBP18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 TLR2O60603 784 aa18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 IREB2P48200 963 aaKnown RBP18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 PAWRQ96IZ0 340 aaKnown RBP18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 ELP3Q9H9T3 547 aa18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 PODXL2Q9NZ53 605 aa18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 ANKIB1Q9P2G1 1089 aa18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 GGA1Q9UJY5 639 aa18.98■□□□□ 0.63
SYNCRIP-203ENST00000444272 TFRCP02786 760 aaKnown RBP18.97■□□□□ 0.63
SYNCRIP-203ENST00000444272 CTGFP29279 349 aa18.97■□□□□ 0.63
SYNCRIP-203ENST00000444272 ANKRD13AQ8IZ07 590 aa18.97■□□□□ 0.63
SYNCRIP-203ENST00000444272 PHACTR3Q96KR7 559 aa18.97■□□□□ 0.63
SYNCRIP-203ENST00000444272 MIS18AQ9NYP9 233 aa18.97■□□□□ 0.63
SYNCRIP-203ENST00000444272 OSBPP22059 807 aa18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 DCTN1Q14203 1278 aa18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 PODNQ7Z5L7 613 aa18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 RTF1Q92541 710 aaKnown RBP18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 CDX2Q99626 313 aaPredicted RBP18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 MYPNQ86TC9 1320 aa18.96■□□□□ 0.63
SYNCRIP-203ENST00000444272 WDHD1O75717 1129 aaPredicted RBP18.95■□□□□ 0.62
SYNCRIP-203ENST00000444272 PSMC4P43686 418 aa18.95■□□□□ 0.62
SYNCRIP-203ENST00000444272 TJAP1Q5JTD0 557 aa18.95■□□□□ 0.62
SYNCRIP-203ENST00000444272 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
SYNCRIP-203ENST00000444272 SYNGAP1Q96PV0 1343 aa18.95■□□□□ 0.62
SYNCRIP-203ENST00000444272 USP2O75604 605 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms