RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CCDC57Q2TAC2 916 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 CCDC40Q4G0X9 1142 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 INTS8Q75QN2 995 aaKnown RBP11.68□□□□□ -0.54
LIN54-202ENST00000442461 PHAXQ9H814 394 aaKnown RBP11.68□□□□□ -0.54
LIN54-202ENST00000442461 CHMLP26374 656 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 CDC25BP30305 580 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 PPP1R13BQ96KQ4 1090 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 SELENOOQ9BVL4 669 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
LIN54-202ENST00000442461 MYO1BO43795 1136 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 TNNC1P63316 161 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 IFI16Q16666 785 aaKnown RBP11.68□□□□□ -0.54
LIN54-202ENST00000442461 CCDC42Q96M95 316 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 PARD6BQ9BYG5 372 aa11.68□□□□□ -0.54
LIN54-202ENST00000442461 PHLPP2Q6ZVD8 1323 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 CLTAP09496 248 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 IDEP14735 1019 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 TRIM68Q6AZZ1 485 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
LIN54-202ENST00000442461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.67□□□□□ -0.54
LIN54-202ENST00000442461 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 SEPT11Q9NVA2 429 aaKnown RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 KRT18P05783 430 aaKnown RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 TMEM132EQ6IEE7 984 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 IFT20Q8IY31 132 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 GYS2P54840 703 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 ZBTB16Q05516 673 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 IFT88Q13099 833 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 RASIP1Q5U651 963 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 GKAP1Q5VSY0 366 aaPredicted RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
LIN54-202ENST00000442461 PLEKHA4Q9H4M7 779 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 MRFAP1Q9Y605 127 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 FAM169AQ9Y6X4 670 aa11.67□□□□□ -0.54
LIN54-202ENST00000442461 A0A1W2PRG0 241 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 SLMAPQ14BN4 828 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
LIN54-202ENST00000442461 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 VCX3BQ9H321 246 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 VCX3AQ9NNX9 186 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 BMP2KQ9NSY1 1161 aaPredicted RBP11.66□□□□□ -0.54
LIN54-202ENST00000442461 PPP2R2CQ9Y2T4 447 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 A0A1B0GVL5 298 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 F6X3S4 739 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 APOBRQ0VD83 1088 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 CCDC174Q6PII3 467 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 DZIP1Q86YF9 867 aaKnown RBP11.66□□□□□ -0.54
LIN54-202ENST00000442461 ZNF710Q8N1W2 664 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 LRRC45Q96CN5 670 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 SAMM50Q9Y512 469 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 STAG1Q8WVM7 1258 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
LIN54-202ENST00000442461 PAK2Q13177 524 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.54
LIN54-202ENST00000442461 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
LIN54-202ENST00000442461 NUTM2FA1L443 756 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 ATP2B2Q01814 1243 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 NUTM2GQ5VZR2 741 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 UBLCP1Q8WVY7 318 aaPredicted RBP11.65□□□□□ -0.54
LIN54-202ENST00000442461 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
LIN54-202ENST00000442461 TSC22D3Q99576 134 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 ACTR5Q9H9F9 607 aaPredicted RBP11.65□□□□□ -0.54
LIN54-202ENST00000442461 ZMYM4Q5VZL5 1548 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 PPP1R12AO14974 1030 aaPredicted RBP11.65□□□□□ -0.54
LIN54-202ENST00000442461 MARCKSP29966 332 aaPredicted RBP11.65□□□□□ -0.54
LIN54-202ENST00000442461 CCDC63Q8NA47 563 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 SMC6Q96SB8 1091 aa11.65□□□□□ -0.54
LIN54-202ENST00000442461 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.55
LIN54-202ENST00000442461 ELF1P32519 619 aa11.65□□□□□ -0.55
LIN54-202ENST00000442461 VSIG1Q86XK7 387 aa11.65□□□□□ -0.55
LIN54-202ENST00000442461 MEIS3Q99687 375 aa11.65□□□□□ -0.55
LIN54-202ENST00000442461 PYM1Q9BRP8 204 aaKnown RBP11.65□□□□□ -0.55
LIN54-202ENST00000442461 CTIFO43310 598 aaKnown RBP11.64□□□□□ -0.55
LIN54-202ENST00000442461 TRIM47Q96LD4 638 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 CCDC77Q9BR77 488 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 DONSONQ9NYP3 566 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
LIN54-202ENST00000442461 MTX1Q13505 466 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
LIN54-202ENST00000442461 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
LIN54-202ENST00000442461 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 CETN2P41208 172 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 CLEC17AQ6ZS10 378 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
LIN54-202ENST00000442461 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
LIN54-202ENST00000442461 DAPK1P53355 1430 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms