RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 SCAND2PQ9GZW5 306 aaPredicted RBP22.26■■□□□ 1.15
LRCH3-207ENST00000441090 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
LRCH3-207ENST00000441090 RIPOR2Q9Y4F9 1068 aa22.26■■□□□ 1.15
LRCH3-207ENST00000441090 FUCA2Q9BTY2 467 aa22.25■■□□□ 1.15
LRCH3-207ENST00000441090 ZBTB1Q9Y2K1 713 aa22.25■■□□□ 1.15
LRCH3-207ENST00000441090 A0A0G2JLW4 131 aa22.24■■□□□ 1.15
LRCH3-207ENST00000441090 EXOC5O00471 708 aa22.24■■□□□ 1.15
LRCH3-207ENST00000441090 AHDC1Q5TGY3 1603 aaPredicted RBP22.24■■□□□ 1.15
LRCH3-207ENST00000441090 ITGA6P23229 1130 aa22.24■■□□□ 1.15
LRCH3-207ENST00000441090 CTSWP56202 376 aa22.24■■□□□ 1.15
LRCH3-207ENST00000441090 SCARF1Q14162 830 aa22.24■■□□□ 1.15
LRCH3-207ENST00000441090 GREM2Q9H772 168 aa22.24■■□□□ 1.15
LRCH3-207ENST00000441090 ATP2B3Q16720 1220 aa22.23■■□□□ 1.15
LRCH3-207ENST00000441090 ANO8Q9HCE9 1232 aaPredicted RBP22.23■■□□□ 1.15
LRCH3-207ENST00000441090 ZAP70P43403 619 aa22.23■■□□□ 1.15
LRCH3-207ENST00000441090 RESTQ13127 1097 aa22.23■■□□□ 1.15
LRCH3-207ENST00000441090 METTL24Q5JXM2 366 aa22.23■■□□□ 1.15
LRCH3-207ENST00000441090 LDHAL6AQ6ZMR3 332 aa22.23■■□□□ 1.15
LRCH3-207ENST00000441090 CCDC39Q9UFE4 941 aa22.23■■□□□ 1.15
LRCH3-207ENST00000441090 DDX60Q8IY21 1712 aaKnown RBP22.22■■□□□ 1.15
LRCH3-207ENST00000441090 ANKRD18BA2A2Z9 1011 aa22.22■■□□□ 1.15
LRCH3-207ENST00000441090 ERVV-1B6SEH8 477 aa22.22■■□□□ 1.15
LRCH3-207ENST00000441090 APOBRQ0VD83 1088 aa22.22■■□□□ 1.15
LRCH3-207ENST00000441090 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
LRCH3-207ENST00000441090 NSUN7Q8NE18 718 aaKnown RBP22.22■■□□□ 1.15
LRCH3-207ENST00000441090 MYO5AQ9Y4I1 1855 aaKnown RBP22.22■■□□□ 1.15
LRCH3-207ENST00000441090 IRS4O14654 1257 aaPredicted RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 FOXP2O15409 715 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 IL6STP40189 918 aaPredicted RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 FBXL16Q8N461 479 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 APPBP2Q92624 585 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 SPATA32Q96LK8 384 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 ZSCAN16Q9H4T2 348 aaPredicted RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 CTNNA3Q9UI47 895 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 WASHC4Q2M389 1173 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 TTLL5Q6EMB2 1281 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 LEO1Q8WVC0 666 aaPredicted RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 SYTL4Q96C24 671 aaPredicted RBP22.21■■□□□ 1.15
LRCH3-207ENST00000441090 DDX11Q96FC9 970 aa22.21■■□□□ 1.15
LRCH3-207ENST00000441090 ARAP2Q8WZ64 1704 aa22.2■■□□□ 1.14
LRCH3-207ENST00000441090 LRP5O75197 1615 aa22.2■■□□□ 1.14
LRCH3-207ENST00000441090 H3BQV1 296 aa22.2■■□□□ 1.14
LRCH3-207ENST00000441090 HMGN5P82970 282 aaKnown RBP22.2■■□□□ 1.14
LRCH3-207ENST00000441090 IFFO2Q5TF58 517 aa22.2■■□□□ 1.14
LRCH3-207ENST00000441090 VGLL2Q8N8G2 317 aa22.2■■□□□ 1.14
LRCH3-207ENST00000441090 ZNF512BQ96KM6 892 aaPredicted RBP22.2■■□□□ 1.14
LRCH3-207ENST00000441090 TRMT112Q9UI30 125 aaKnown RBP22.2■■□□□ 1.14
LRCH3-207ENST00000441090 ZKSCAN5Q9Y2L8 839 aa22.2■■□□□ 1.14
LRCH3-207ENST00000441090 PDE8AO60658 829 aa22.19■■□□□ 1.14
LRCH3-207ENST00000441090 CTDNEP1O95476 244 aa22.19■■□□□ 1.14
LRCH3-207ENST00000441090 ZNF274Q96GC6 653 aaPredicted RBP22.19■■□□□ 1.14
LRCH3-207ENST00000441090 TFIP11Q9UBB9 837 aaKnown RBP22.19■■□□□ 1.14
LRCH3-207ENST00000441090 MCM5P33992 734 aa22.19■■□□□ 1.14
LRCH3-207ENST00000441090 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
LRCH3-207ENST00000441090 CNNM1Q9NRU3 951 aa22.19■■□□□ 1.14
LRCH3-207ENST00000441090 LIG1P18858 919 aa22.18■■□□□ 1.14
LRCH3-207ENST00000441090 MCAMP43121 646 aa22.18■■□□□ 1.14
LRCH3-207ENST00000441090 IMMTQ16891 758 aaKnown RBP22.18■■□□□ 1.14
LRCH3-207ENST00000441090 NAA16Q6N069 864 aaPredicted RBP22.18■■□□□ 1.14
LRCH3-207ENST00000441090 PI16Q6UXB8 463 aa22.18■■□□□ 1.14
LRCH3-207ENST00000441090 NAP1L5Q96NT1 182 aaPredicted RBP22.18■■□□□ 1.14
LRCH3-207ENST00000441090 SALL1Q9NSC2 1324 aa22.18■■□□□ 1.14
LRCH3-207ENST00000441090 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
LRCH3-207ENST00000441090 ZNF500O60304 480 aaPredicted RBP22.18■■□□□ 1.14
LRCH3-207ENST00000441090 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
LRCH3-207ENST00000441090 KIF3AQ9Y496 699 aa22.18■■□□□ 1.14
LRCH3-207ENST00000441090 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 NRAPQ86VF7 1730 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 PDIA3P30101 505 aaKnown RBP22.17■■□□□ 1.14
LRCH3-207ENST00000441090 EVCP57679 992 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 ZNF34Q8IZ26 560 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 CHMP4CQ96CF2 233 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 NUP62CLQ9H1M0 184 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 TBC1D2BQ9UPU7 963 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 SLIT2O94813 1529 aa22.17■■□□□ 1.14
LRCH3-207ENST00000441090 GOLGA6L4A6NEF3 574 aa22.16■■□□□ 1.14
LRCH3-207ENST00000441090 PDE8BO95263 885 aa22.16■■□□□ 1.14
LRCH3-207ENST00000441090 FGAP02671 866 aa22.16■■□□□ 1.14
LRCH3-207ENST00000441090 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.16■■□□□ 1.146e-7■■■□□ 15
LRCH3-207ENST00000441090 USP25Q9UHP3 1055 aa22.16■■□□□ 1.14
LRCH3-207ENST00000441090 ATRNO75882 1429 aa22.16■■□□□ 1.14
LRCH3-207ENST00000441090 CCT2P78371 535 aaKnown RBP22.16■■□□□ 1.14
LRCH3-207ENST00000441090 CHST3Q7LGC8 479 aa22.16■■□□□ 1.14
LRCH3-207ENST00000441090 RREB1Q92766 1687 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 GPAA1O43292 621 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 CCDC192P0DO97 292 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 MAP3K11Q16584 847 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 ZSCAN25Q6NSZ9 544 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 CFAP45Q9UL16 551 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 PHLPP1O60346 1717 aa22.15■■□□□ 1.14
LRCH3-207ENST00000441090 ADD2P35612 726 aa22.14■■□□□ 1.14
LRCH3-207ENST00000441090 TTF1Q15361 905 aaPredicted RBP22.14■■□□□ 1.14
LRCH3-207ENST00000441090 AK7Q96M32 723 aa22.14■■□□□ 1.14
LRCH3-207ENST00000441090 CDCA7Q9BWT1 371 aaPredicted RBP22.14■■□□□ 1.14
LRCH3-207ENST00000441090 NCOA5Q9HCD5 579 aaKnown RBP22.14■■□□□ 1.14
LRCH3-207ENST00000441090 DDX19AQ9NUU7 478 aaKnown RBP22.14■■□□□ 1.14
LRCH3-207ENST00000441090 HAND2P61296 217 aa22.14■■□□□ 1.13
LRCH3-207ENST00000441090 PGBD1Q96JS3 809 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms