RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 KSR2Q6VAB6 950 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 COA1Q9GZY4 146 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 DBNDD1Q9H9R9 158 aa7.67□□□□□ -1.18
PTPRR-204ENST00000440835 NOP58Q9Y2X3 529 aaKnown RBP7.67□□□□□ -1.18
PTPRR-204ENST00000440835 NF2P35240 595 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 ZNF157P51786 506 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-204ENST00000440835 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 ATP5J2-PTCD1G3V325 749 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 RIMBP2O15034 1052 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 CTSWP56202 376 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 FKBP1AP62942 108 aaKnown RBP7.66□□□□□ -1.18
PTPRR-204ENST00000440835 DGKZQ13574 1117 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 TBC1D10BQ4KMP7 808 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-204ENST00000440835 STRIP1Q5VSL9 837 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 SAMD7Q7Z3H4 446 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 CDCA5Q96FF9 252 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 PRKRIP1Q9H875 184 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-204ENST00000440835 PPP2R3BQ9Y5P8 575 aa7.66□□□□□ -1.18
PTPRR-204ENST00000440835 KIF23Q02241 960 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 FMR1Q06787 632 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 NEUROD2Q15784 382 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 C15orf52Q6ZUT6 534 aaKnown RBP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 CTU1Q7Z7A3 348 aaKnown RBP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 APOBEC3FQ8IUX4 373 aaKnown RBP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 CCDC146Q8IYE0 955 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 MYD88Q99836 296 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 ZNF408Q9H9D4 720 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 MYOZ2Q9NPC6 264 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 CASP8AP2Q9UKL3 1982 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 IRX6P78412 446 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 SREBF2Q12772 1141 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 SCARF1Q14162 830 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 OGFOD1Q8N543 542 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 MYH16Q9H6N6 1097 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 RNF186Q9NXI6 227 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 GGA3Q9NZ52 723 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 HDAC9Q9UKV0 1011 aa7.65□□□□□ -1.18
PTPRR-204ENST00000440835 ZBTB12Q9Y330 459 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-204ENST00000440835 ALDH1A1P00352 501 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 CDK11BP21127 795 aaKnown RBP7.65□□□□□ -1.19
PTPRR-204ENST00000440835 TM4SF4P48230 202 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 INHBEP58166 350 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 DOK7Q18PE1 504 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 KRT24Q2M2I5 525 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 FAM161AQ3B820 660 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 RASAL3Q86YV0 1011 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 CNKSR2Q8WXI2 1034 aa7.65□□□□□ -1.19
PTPRR-204ENST00000440835 IGHMBP2P38935 993 aaKnown RBP7.64□□□□□ -1.19
PTPRR-204ENST00000440835 GRM1Q13255 1194 aa7.64□□□□□ -1.19
PTPRR-204ENST00000440835 SPEF2Q9C093 1822 aa7.64□□□□□ -1.19
PTPRR-204ENST00000440835 COL4A1P02462 1669 aa7.64□□□□□ -1.19
PTPRR-204ENST00000440835 ADM5C9JUS6 153 aa7.64□□□□□ -1.19
PTPRR-204ENST00000440835 H7C1W4 665 aa7.64□□□□□ -1.19
PTPRR-204ENST00000440835 TTLL11Q8NHH1 800 aa7.64□□□□□ -1.19
PTPRR-204ENST00000440835 CCT4P50991 539 aaKnown RBP7.63□□□□□ -1.19
PTPRR-204ENST00000440835 ANGEL2Q5VTE6 544 aaKnown RBP7.63□□□□□ -1.19
PTPRR-204ENST00000440835 ARMC9Q7Z3E5 817 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 SLC51AQ86UW1 340 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 CSRNP1Q96S65 589 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 SEC31BQ9NQW1 1179 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 MINPP1Q9UNW1 487 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 MAP3K2Q9Y2U5 619 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 A0A1B0GUL6 1792 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 SHTN1A0MZ66 631 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 APAF1O14727 1248 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 DACT2Q5SW24 774 aa7.63□□□□□ -1.19
PTPRR-204ENST00000440835 PHAXQ9H814 394 aaKnown RBP7.63□□□□□ -1.19
PTPRR-204ENST00000440835 NEURL1BA8MQ27 555 aa7.62□□□□□ -1.19
PTPRR-204ENST00000440835 CSF1RP07333 972 aa7.62□□□□□ -1.19
PTPRR-204ENST00000440835 HMGB1P09429 215 aaKnown RBP7.62□□□□□ -1.19
PTPRR-204ENST00000440835 MAP3K11Q16584 847 aa7.62□□□□□ -1.19
PTPRR-204ENST00000440835 ZBED3Q96IU2 234 aaPredicted RBP7.62□□□□□ -1.19
PTPRR-204ENST00000440835 ARAP2Q8WZ64 1704 aa7.62□□□□□ -1.19
PTPRR-204ENST00000440835 RBBP6Q7Z6E9 1792 aaKnown RBP7.62□□□□□ -1.19
PTPRR-204ENST00000440835 RBM26Q5T8P6 1007 aaKnown RBP7.62□□□□□ -1.19
PTPRR-204ENST00000440835 C8orf58Q8NAV2 365 aa7.62□□□□□ -1.19
PTPRR-204ENST00000440835 IGKV5-2P06315 115 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 WDR63Q8IWG1 891 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 LINS1Q8NG48 757 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 ZNF804BA4D1E1 1349 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 PI4KAP2A4QPH2 592 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 MANSC4A6NHS7 340 aaPredicted RBP7.61□□□□□ -1.19
PTPRR-204ENST00000440835 EGFRP00533 1210 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 ZBTB48P10074 688 aaPredicted RBP7.61□□□□□ -1.19
PTPRR-204ENST00000440835 PI4KAP1Q8N8J0 262 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 KCNQ5Q9NR82 932 aa7.61□□□□□ -1.19
PTPRR-204ENST00000440835 TRPA1O75762 1119 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 FGD1P98174 961 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 GCKRQ14397 625 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 LDLRAD1Q5T700 205 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 MPHOSPH8Q99549 860 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 MRS2Q9HD23 443 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 TSKSQ9UJT2 592 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 ANKRD18BA2A2Z9 1011 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
PTPRR-204ENST00000440835 SUPT20HL1Q3ZLR7 823 aa7.6□□□□□ -1.19
PTPRR-204ENST00000440835 INTS3Q68E01 1043 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms