RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 MSH6P52701 1360 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 RNF187Q5TA31 235 aaPredicted RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 C17orf53Q8N3J3 647 aaPredicted RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 CUL5Q93034 780 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
CCBE1-202ENST00000439986 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
CCBE1-202ENST00000439986 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
CCBE1-202ENST00000439986 CTNNA2P26232 953 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
CCBE1-202ENST00000439986 CRACR2AQ9BSW2 395 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 TRMT112Q9UI30 125 aaKnown RBP13.17□□□□□ -0.3
CCBE1-202ENST00000439986 ZNF131P52739 623 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 KIF4BQ2VIQ3 1234 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
CCBE1-202ENST00000439986 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 ACEP12821 1306 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 GOLGA8AA7E2F4 631 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 MAFGO15525 162 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
CCBE1-202ENST00000439986 CPA1P15085 419 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 HAND2P61296 217 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 SAMM50Q9Y512 469 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 KIF3CO14782 793 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 RBBP5Q15291 538 aaKnown RBP13.16□□□□□ -0.3
CCBE1-202ENST00000439986 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 PTPRTO14522 1441 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 CEP104O60308 925 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 PKP1Q13835 747 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
CCBE1-202ENST00000439986 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 GBP3Q9H0R5 595 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 KIF21AQ7Z4S6 1674 aa13.16□□□□□ -0.3
CCBE1-202ENST00000439986 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
CCBE1-202ENST00000439986 GSPT1P15170 499 aaKnown RBP13.15□□□□□ -0.3
CCBE1-202ENST00000439986 MAP7D1Q3KQU3 841 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 KIF20AO95235 890 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 MAP2K2P36507 400 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 ZBTB3Q9H5J0 574 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 ZNF213O14771 459 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
CCBE1-202ENST00000439986 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
CCBE1-202ENST00000439986 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
CCBE1-202ENST00000439986 C6orf229H3BNL8 230 aa13.15□□□□□ -0.31
CCBE1-202ENST00000439986 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 H0YC42 278 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 SLC5A1P13866 664 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 CEP128Q6ZU80 1094 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 SPATA24Q86W54 205 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 FOXO3O43524 673 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 ZNF500O60304 480 aaPredicted RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 SLU7O95391 586 aaKnown RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 CETN2P41208 172 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
CCBE1-202ENST00000439986 GNG11P61952 73 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 G2E3Q7L622 706 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 ZNF354CQ86Y25 554 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 PPIP5K1Q6PFW1 1433 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 AMOTQ4VCS5 1084 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 MFSD4BQ5TF39 518 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 RGS22Q8NE09 1264 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 ANKRD24Q8TF21 1146 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 SLC24A3Q9HC58 644 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
CCBE1-202ENST00000439986 PRC1O43663 620 aa13.13□□□□□ -0.31
CCBE1-202ENST00000439986 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
CCBE1-202ENST00000439986 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
CCBE1-202ENST00000439986 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
CCBE1-202ENST00000439986 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
CCBE1-202ENST00000439986 BRD1O95696 1058 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms