RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 MX1P20591 662 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 PDE4AP27815 886 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 TIMM10P62072 90 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 XAGE2Q96GT9 111 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 NEUROD6Q96NK8 337 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 EYA3Q99504 573 aa15.54■□□□□ 0.08
SCLT1-202ENST00000439369 LTBP3Q9NS15 1303 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 IRS2Q9Y4H2 1338 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 ERC2O15083 957 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 CCDC158Q5M9N0 1113 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 GORABQ5T7V8 394 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 PLEKHM2Q8IWE5 1019 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 DBNDD2Q9BQY9 259 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-202ENST00000439369 ECHDC1Q9NTX5 307 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 BCS1LQ9Y276 419 aa15.53■□□□□ 0.08
SCLT1-202ENST00000439369 C6orf229H3BNL8 230 aa15.52■□□□□ 0.08
SCLT1-202ENST00000439369 UQCRFS1P1P0C7P4 283 aa15.52■□□□□ 0.08
SCLT1-202ENST00000439369 ATP5JP18859 108 aa15.52■□□□□ 0.08
SCLT1-202ENST00000439369 PDE1AP54750 535 aa15.52■□□□□ 0.08
SCLT1-202ENST00000439369 C16orf71Q8IYS4 520 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-202ENST00000439369 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.52■□□□□ 0.082e-6■■□□□ 12.4
SCLT1-202ENST00000439369 POLLQ9UGP5 575 aa15.52■□□□□ 0.08
SCLT1-202ENST00000439369 SEMA3EO15041 775 aa15.51■□□□□ 0.07
SCLT1-202ENST00000439369 GLRX3O76003 335 aaKnown RBP15.51■□□□□ 0.07
SCLT1-202ENST00000439369 FKBP4Q02790 459 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCLT1-202ENST00000439369 ZNF804AQ7Z570 1209 aa15.51■□□□□ 0.07
SCLT1-202ENST00000439369 FBXO33Q7Z6M2 555 aa15.51■□□□□ 0.07
SCLT1-202ENST00000439369 GNL3LQ9NVN8 582 aaKnown RBP15.51■□□□□ 0.07
SCLT1-202ENST00000439369 TLR7Q9NYK1 1049 aaKnown RBP15.51■□□□□ 0.07
SCLT1-202ENST00000439369 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 ARID4AP29374 1257 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 ADORA1P30542 326 aa15.5■□□□□ 0.07
SCLT1-202ENST00000439369 HIBADHP31937 336 aaKnown RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 CCDC102BQ68D86 513 aa15.5■□□□□ 0.07
SCLT1-202ENST00000439369 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
SCLT1-202ENST00000439369 OTUD7AQ8TE49 926 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 FAM84BQ96KN1 310 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 ZC3H12CQ9C0D7 883 aaKnown RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-202ENST00000439369 FER1L6Q2WGJ9 1857 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 SNAP23O00161 211 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 TTC39AQ5SRH9 613 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 VPS37DQ86XT2 251 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 PI4K2BQ8TCG2 481 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 COA1Q9GZY4 146 aa15.49■□□□□ 0.07
SCLT1-202ENST00000439369 TICAM2Q86XR7 235 aa15.48■□□□□ 0.07
SCLT1-202ENST00000439369 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
SCLT1-202ENST00000439369 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-202ENST00000439369 IGSF3O75054 1194 aa15.47■□□□□ 0.07
SCLT1-202ENST00000439369 IL1R1P14778 569 aa15.47■□□□□ 0.07
SCLT1-202ENST00000439369 PHKA1P46020 1223 aa15.47■□□□□ 0.07
SCLT1-202ENST00000439369 GYG1P46976 350 aa15.47■□□□□ 0.07
SCLT1-202ENST00000439369 BCAMP50895 628 aa15.47■□□□□ 0.07
SCLT1-202ENST00000439369 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
SCLT1-202ENST00000439369 NFKBIEO00221 500 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 KLRK1P26718 216 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 RGS3P49796 1198 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 BMP2KLQ5H9B9 411 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 TTC22Q5TAA0 569 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 PODNQ7Z5L7 613 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 TXNRD3Q86VQ6 643 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 TDRD7Q8NHU6 1098 aaKnown RBP15.46■□□□□ 0.07
SCLT1-202ENST00000439369 HAUS7Q99871 368 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
SCLT1-202ENST00000439369 PPIP5K2O43314 1243 aa15.45■□□□□ 0.06
SCLT1-202ENST00000439369 CD209Q9NNX6 404 aa15.45■□□□□ 0.06
SCLT1-202ENST00000439369 G3V3G9 751 aa15.44■□□□□ 0.06
SCLT1-202ENST00000439369 GRIN3BO60391 1043 aa15.44■□□□□ 0.06
SCLT1-202ENST00000439369 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
SCLT1-202ENST00000439369 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
SCLT1-202ENST00000439369 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SCLT1-202ENST00000439369 SPATA5Q8NB90 893 aa15.44■□□□□ 0.06
SCLT1-202ENST00000439369 GPR101Q96P66 508 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-202ENST00000439369 FAM205AQ6ZU69 1335 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 RIMBP2O15034 1052 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 MCAMP43121 646 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
SCLT1-202ENST00000439369 AOC3Q16853 763 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 TMED8Q6PL24 325 aaPredicted RBP15.43■□□□□ 0.06
SCLT1-202ENST00000439369 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 BOLA2Q9H3K6 86 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 HMG20BQ9P0W2 317 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 SALL1Q9NSC2 1324 aa15.43■□□□□ 0.06
SCLT1-202ENST00000439369 RFX7Q2KHR2 1363 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 FRAT2O75474 233 aaPredicted RBP15.42■□□□□ 0.06
SCLT1-202ENST00000439369 YBX3P16989 372 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■□□□ 12
SCLT1-202ENST00000439369 SCARF1Q14162 830 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 TSHZ3Q63HK5 1081 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 ARHGAP27Q6ZUM4 889 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 SKAP1Q86WV1 359 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
SCLT1-202ENST00000439369 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
SCLT1-202ENST00000439369 TBC1D22AQ8WUA7 517 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms