RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 NLRP13Q86W25 1043 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 SHKBP1Q8TBC3 707 aa5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 CALR3Q96L12 384 aaKnown RBP5.53□□□□□ -1.52
HMGB1P12-201ENST00000438594 UBAP1LF5GYI3 381 aa5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 DDX3YO15523 660 aaKnown RBP5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 HYAL2Q12891 473 aa5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 UVSSAQ2YD98 709 aa5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 AEBP1Q8IUX7 1158 aa5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 UBASH3BQ8TF42 649 aa5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 PPP1R12CQ9BZL4 782 aa5.52□□□□□ -1.53
HMGB1P12-201ENST00000438594 PRR19A6NJB7 356 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 WDR64B1ANS9 1081 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 FSCN2O14926 492 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 BMP3P12645 472 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 COX20Q5RI15 118 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 COL13A1Q5TAT6 717 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 TTC39BQ5VTQ0 682 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 BEND4Q6ZU67 534 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 DTX1Q86Y01 620 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 DHX37Q8IY37 1157 aaKnown RBP5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 FAM200AQ8TCP9 573 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 CLUAP1Q96AJ1 413 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 FAM46AQ96IP4 442 aaKnown RBP5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 MYRFLQ96LU7 910 aa5.51□□□□□ -1.53
HMGB1P12-201ENST00000438594 A6NJR5 290 aa5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 HOXD8P13378 290 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 BRD2P25440 801 aaKnown RBP5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 TRIP4Q15650 581 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 CDCA8Q53HL2 280 aa5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 KIAA1211Q6ZU35 1233 aa5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 PROSER2Q86WR7 435 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 CLEC10AQ8IUN9 316 aa5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 PRIMPOLQ96LW4 560 aa5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 RASSF4Q9H2L5 321 aa5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 SH2B1Q9NRF2 756 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P12-201ENST00000438594 GAS2O43903 313 aaKnown RBP5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 RXRBP28702 533 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 FAM20CQ8IXL6 584 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 ETFBKMTQ8IXQ9 262 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 KLHL23Q8NBE8 558 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 OR13H1Q8NG92 308 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 UBE2Q2Q8WVN8 375 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 PIK3R5Q8WYR1 880 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 KLHDC7BQ96G42 594 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 MFSD14AQ96MC6 490 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 FAM83CQ9BQN1 747 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 SEC31BQ9NQW1 1179 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 ATG3Q9NT62 314 aa5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 ANGEL1Q9UNK9 670 aaKnown RBP5.49□□□□□ -1.53
HMGB1P12-201ENST00000438594 E9PSI1 815 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 PTPRAP18433 802 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 EPHA1P21709 976 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 RFX1P22670 979 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 PREPP48147 710 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 NLRP12P59046 1061 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 FKBP5Q13451 457 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 FDX2Q6P4F2 183 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 NCAPG2Q86XI2 1143 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 FBXL6Q8N531 539 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 GZF1Q9H116 711 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 FAM13BQ9NYF5 915 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 ADGRE2Q9UHX3 823 aa5.48□□□□□ -1.53
HMGB1P12-201ENST00000438594 PRMT3O60678 531 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 ADAM11O75078 769 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 HOXA10P31260 410 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 CABP4P57796 275 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 ANKRD34AQ69YU3 496 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 ABI1Q8IZP0 508 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 GIMAP7Q8NHV1 300 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 SLC7A3Q8WY07 619 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 MKNK1Q9BUB5 465 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 RUSC1Q9BVN2 902 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 SAP130Q9H0E3 1048 aa5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 FNDC3AQ9Y2H6 1198 aaKnown RBP5.47□□□□□ -1.53
HMGB1P12-201ENST00000438594 CYP2E1P05181 493 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 C16orf46Q6P387 395 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 ADAMTSL4Q6UY14 1074 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 GPR152Q8TDT2 470 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 PBX4Q9BYU1 374 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 RNF208Q9H0X6 261 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 PIM2Q9P1W9 311 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 LEMD3Q9Y2U8 911 aa5.46□□□□□ -1.54
HMGB1P12-201ENST00000438594 NAA30Q147X3 362 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P12-201ENST00000438594 OSBPL1AQ9BXW6 950 aa5.45□□□□□ -1.54
HMGB1P12-201ENST00000438594 ABI2Q9NYB9 513 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P12-201ENST00000438594 USP35Q9P2H5 1018 aa5.45□□□□□ -1.54
HMGB1P12-201ENST00000438594 KANSL3Q9P2N6 904 aa5.45□□□□□ -1.54
HMGB1P12-201ENST00000438594 H3BRJ5 948 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 MAP4P27816 1152 aaKnown RBP5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 ZAP70P43403 619 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 FAM26DQ5JW98 314 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 OGFOD2Q6N063 350 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 TP53INP2Q8IXH6 220 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 FAM177A1Q8N128 213 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 COL26A1Q96A83 441 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 POP1Q99575 1024 aaKnown RBP5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms