RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 CCDC141Q6ZP82 1450 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 SSBP05455 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPEN-202ENST00000438066 GRM2Q14416 872 aa8.67□□□□□ -1.02
SPEN-202ENST00000438066 TCEAL1Q15170 157 aa8.67□□□□□ -1.02
SPEN-202ENST00000438066 C1orf127Q8N9H9 656 aa8.67□□□□□ -1.02
SPEN-202ENST00000438066 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
SPEN-202ENST00000438066 INSM2Q96T92 566 aaPredicted RBP8.67□□□□□ -1.02
SPEN-202ENST00000438066 CHRDQ9H2X0 955 aa8.67□□□□□ -1.02
SPEN-202ENST00000438066 ANKIB1Q9P2G1 1089 aa8.67□□□□□ -1.02
SPEN-202ENST00000438066 MRPL42Q9Y6G3 142 aaKnown RBP8.67□□□□□ -1.02
SPEN-202ENST00000438066 ABCA9Q8IUA7 1624 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 PLXNC1O60486 1568 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 PLEKHH2Q8IVE3 1493 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 WDR7Q9Y4E6 1490 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 GPC1P35052 558 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 FOXC1Q12948 553 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 LRRC69Q6ZNQ3 347 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 KIAA0825Q8IV33 1275 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 GALNT12Q8IXK2 581 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 ABCC1P33527 1531 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 KDM5DQ9BY66 1539 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 PZPP20742 1482 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 KIAA1107Q9UPP5 1409 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
SPEN-202ENST00000438066 TIMP2P16035 220 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 GSTT1P30711 240 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 MRFAP1L1Q96HT8 127 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 ZNF408Q9H9D4 720 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
SPEN-202ENST00000438066 PLCH2O75038 1416 aa8.65□□□□□ -1.02
SPEN-202ENST00000438066 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.03
SPEN-202ENST00000438066 ARSJQ5FYB0 599 aaPredicted RBP8.65□□□□□ -1.03
SPEN-202ENST00000438066 TRIM56Q9BRZ2 755 aaKnown RBP8.65□□□□□ -1.03
SPEN-202ENST00000438066 NOC4LQ9BVI4 516 aaKnown RBP8.65□□□□□ -1.03
SPEN-202ENST00000438066 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.03
SPEN-202ENST00000438066 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.03
SPEN-202ENST00000438066 ADAMTS1Q9UHI8 967 aa8.65□□□□□ -1.03
SPEN-202ENST00000438066 XYLBO75191 536 aa8.64□□□□□ -1.03
SPEN-202ENST00000438066 ATP4AP20648 1035 aa8.64□□□□□ -1.03
SPEN-202ENST00000438066 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
SPEN-202ENST00000438066 RNF144AP50876 292 aaPredicted RBP8.64□□□□□ -1.03
SPEN-202ENST00000438066 CCDC85BQ15834 202 aaPredicted RBP8.64□□□□□ -1.03
SPEN-202ENST00000438066 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
SPEN-202ENST00000438066 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
SPEN-202ENST00000438066 MRVI1Q9Y6F6 885 aa8.64□□□□□ -1.03
SPEN-202ENST00000438066 ANKRD50Q9ULJ7 1429 aa8.64□□□□□ -1.03
SPEN-202ENST00000438066 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
SPEN-202ENST00000438066 DIEXFQ68CQ4 756 aaKnown RBP8.63□□□□□ -1.03
SPEN-202ENST00000438066 GPATCH3Q96I76 525 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 ABI2Q9NYB9 513 aaPredicted RBP8.63□□□□□ -1.03
SPEN-202ENST00000438066 ARHGEF12Q9NZN5 1544 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 J3QL48 77 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 GBP2P32456 591 aaPredicted RBP8.63□□□□□ -1.03
SPEN-202ENST00000438066 POU4F2Q12837 409 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 RELL1Q8IUW5 271 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 EFR3BQ9Y2G0 817 aa8.63□□□□□ -1.03
SPEN-202ENST00000438066 UNC13BO14795 1591 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 KIF15Q9NS87 1388 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 CES1P23141 567 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 NFX1Q12986 1120 aaKnown RBP8.62□□□□□ -1.03
SPEN-202ENST00000438066 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 MEIOBQ8N635 442 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 C3orf58Q8NDZ4 430 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
SPEN-202ENST00000438066 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 MPHOSPH9Q99550 1183 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 EHD4Q9H223 541 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 CWC22Q9HCG8 908 aaKnown RBP8.62□□□□□ -1.03
SPEN-202ENST00000438066 LATS2Q9NRM7 1088 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 ANKRD30BQ9BXX2 1392 aa8.62□□□□□ -1.03
SPEN-202ENST00000438066 FBXO24O75426 580 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 EPB42P16452 691 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 ETFBP38117 255 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 EIF4A3P38919 411 aaKnown RBP8.61□□□□□ -1.03
SPEN-202ENST00000438066 CTSOP43234 321 aaPredicted RBP8.61□□□□□ -1.03
SPEN-202ENST00000438066 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.034e-8■■■■□ 23
SPEN-202ENST00000438066 FCGRTP55899 365 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 SERINC3Q13530 473 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 PRICKLE2Q7Z3G6 844 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 GLIS3Q8NEA6 775 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.61□□□□□ -1.03
SPEN-202ENST00000438066 ASXL2Q76L83 1435 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
SPEN-202ENST00000438066 RPRD2Q5VT52 1461 aaKnown RBP8.61□□□□□ -1.03
SPEN-202ENST00000438066 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 TYRO3Q06418 890 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 PWP1Q13610 501 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 MAP3K11Q16584 847 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
SPEN-202ENST00000438066 ANKS3Q6ZW76 656 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms