RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 HTTP42858 3142 aa19.38■□□□□ 0.69
DDR1-237ENST00000437124 USP17L3A6NCW0 530 aa19.37■□□□□ 0.69
DDR1-237ENST00000437124 USP17L4A6NCW7 530 aa19.37■□□□□ 0.69
DDR1-237ENST00000437124 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
DDR1-237ENST00000437124 USP17L1Q7RTZ2 530 aa19.37■□□□□ 0.69
DDR1-237ENST00000437124 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
DDR1-237ENST00000437124 XDHP47989 1333 aa19.36■□□□□ 0.69
DDR1-237ENST00000437124 FKTNO75072 461 aa19.36■□□□□ 0.69
DDR1-237ENST00000437124 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
DDR1-237ENST00000437124 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
DDR1-237ENST00000437124 PDE8AO60658 829 aa19.35■□□□□ 0.69
DDR1-237ENST00000437124 NF2P35240 595 aa19.35■□□□□ 0.69
DDR1-237ENST00000437124 NBPF9Q3BBW0 867 aa19.35■□□□□ 0.69
DDR1-237ENST00000437124 CCDC152Q4G0S7 254 aa19.35■□□□□ 0.69
DDR1-237ENST00000437124 NCBP3Q53F19 620 aaKnown RBP19.35■□□□□ 0.69
DDR1-237ENST00000437124 KSR2Q6VAB6 950 aa19.35■□□□□ 0.69
DDR1-237ENST00000437124 IL16Q14005 1332 aa19.34■□□□□ 0.69
DDR1-237ENST00000437124 MKI67P46013 3256 aaKnown RBP19.34■□□□□ 0.69
DDR1-237ENST00000437124 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
DDR1-237ENST00000437124 IGKV5-2P06315 115 aa19.34■□□□□ 0.69
DDR1-237ENST00000437124 MMP14P50281 582 aa19.34■□□□□ 0.69
DDR1-237ENST00000437124 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
DDR1-237ENST00000437124 PRAMEF18Q5VWM3 479 aa19.34■□□□□ 0.69
DDR1-237ENST00000437124 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
DDR1-237ENST00000437124 SCAF8Q9UPN6 1271 aaKnown RBP19.34■□□□□ 0.69
DDR1-237ENST00000437124 ALDH1A1P00352 501 aa19.33■□□□□ 0.68
DDR1-237ENST00000437124 ATP2B4P23634 1241 aa19.33■□□□□ 0.68
DDR1-237ENST00000437124 TTLL12Q14166 644 aaPredicted RBP19.33■□□□□ 0.68
DDR1-237ENST00000437124 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.68
DDR1-237ENST00000437124 INTS3Q68E01 1043 aaKnown RBP19.33■□□□□ 0.68
DDR1-237ENST00000437124 OGFOD1Q8N543 542 aa19.33■□□□□ 0.68
DDR1-237ENST00000437124 STK31Q9BXU1 1019 aa19.33■□□□□ 0.68
DDR1-237ENST00000437124 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
DDR1-237ENST00000437124 MYO3BQ8WXR4 1341 aa19.32■□□□□ 0.68
DDR1-237ENST00000437124 WNT10BO00744 389 aa19.32■□□□□ 0.68
DDR1-237ENST00000437124 DACT2Q5SW24 774 aa19.32■□□□□ 0.68
DDR1-237ENST00000437124 R3HDMLQ9H3Y0 253 aa19.32■□□□□ 0.68
DDR1-237ENST00000437124 MED23Q9ULK4 1368 aa19.32■□□□□ 0.68
DDR1-237ENST00000437124 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
DDR1-237ENST00000437124 LDLRAD1Q5T700 205 aa19.31■□□□□ 0.68
DDR1-237ENST00000437124 G2E3Q7L622 706 aa19.31■□□□□ 0.68
DDR1-237ENST00000437124 ANKRD18AQ8IVF6 992 aa19.31■□□□□ 0.68
DDR1-237ENST00000437124 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
DDR1-237ENST00000437124 ANP32CO43423 234 aa19.3■□□□□ 0.68
DDR1-237ENST00000437124 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
DDR1-237ENST00000437124 INHBEP58166 350 aa19.3■□□□□ 0.68
DDR1-237ENST00000437124 PTPN12Q05209 780 aaKnown RBP19.3■□□□□ 0.68
DDR1-237ENST00000437124 NEXNQ0ZGT2 675 aa19.3■□□□□ 0.68
DDR1-237ENST00000437124 SPRYD7Q5W111 196 aa19.3■□□□□ 0.68
DDR1-237ENST00000437124 ARMC9Q7Z3E5 817 aa19.3■□□□□ 0.68
DDR1-237ENST00000437124 CTSWP56202 376 aa19.29■□□□□ 0.68
DDR1-237ENST00000437124 MKRN3Q13064 507 aaKnown RBP19.29■□□□□ 0.68
DDR1-237ENST00000437124 STRIP1Q5VSL9 837 aa19.29■□□□□ 0.68
DDR1-237ENST00000437124 ZNF646O15015 1829 aaPredicted RBP19.28■□□□□ 0.68
DDR1-237ENST00000437124 MANSC4A6NHS7 340 aaPredicted RBP19.28■□□□□ 0.68
DDR1-237ENST00000437124 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
DDR1-237ENST00000437124 CWF19L2Q2TBE0 894 aaKnown RBP19.28■□□□□ 0.68
DDR1-237ENST00000437124 APOBEC3FQ8IUX4 373 aaKnown RBP19.28■□□□□ 0.68
DDR1-237ENST00000437124 TTLL11Q8NHH1 800 aa19.28■□□□□ 0.68
DDR1-237ENST00000437124 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.68
DDR1-237ENST00000437124 CENPFP49454 3210 aa19.27■□□□□ 0.68
DDR1-237ENST00000437124 OTOP1Q7RTM1 612 aa19.27■□□□□ 0.68
DDR1-237ENST00000437124 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
DDR1-237ENST00000437124 CDC5LQ99459 802 aaKnown RBP19.27■□□□□ 0.68
DDR1-237ENST00000437124 COL1A1P02452 1464 aaPredicted RBP19.27■□□□□ 0.67
DDR1-237ENST00000437124 RBBP6Q7Z6E9 1792 aaKnown RBP19.27■□□□□ 0.67
DDR1-237ENST00000437124 POTEFA5A3E0 1075 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 WTIPA6NIX2 430 aaPredicted RBP19.26■□□□□ 0.67
DDR1-237ENST00000437124 H7C1W4 665 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 ZBTB48P10074 688 aaPredicted RBP19.26■□□□□ 0.67
DDR1-237ENST00000437124 FLIIQ13045 1269 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 IFNL1Q8IU54 200 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 MXD3Q9BW11 206 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 COA1Q9GZY4 146 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 BSDC1Q9NW68 430 aaPredicted RBP19.26■□□□□ 0.67
DDR1-237ENST00000437124 TRIM17Q9Y577 477 aa19.26■□□□□ 0.67
DDR1-237ENST00000437124 UNCXA6NJT0 531 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 VAMP4O75379 141 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 SASH1O94885 1247 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 MAP3K11Q16584 847 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 ZBED3Q96IU2 234 aaPredicted RBP19.25■□□□□ 0.67
DDR1-237ENST00000437124 GREM2Q9H772 168 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 MINPP1Q9UNW1 487 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
DDR1-237ENST00000437124 BRCA2P51587 3418 aa19.25■□□□□ 0.67
DDR1-237ENST00000437124 LAMB1P07942 1786 aa19.24■□□□□ 0.67
DDR1-237ENST00000437124 UBE3BQ7Z3V4 1068 aa19.24■□□□□ 0.67
DDR1-237ENST00000437124 ARMC5Q96C12 935 aa19.24■□□□□ 0.67
DDR1-237ENST00000437124 ANGEL1Q9UNK9 670 aaKnown RBP19.24■□□□□ 0.67
DDR1-237ENST00000437124 CCT4P50991 539 aaKnown RBP19.23■□□□□ 0.67
DDR1-237ENST00000437124 PRKG1Q13976 671 aa19.23■□□□□ 0.67
DDR1-237ENST00000437124 GCKRQ14397 625 aa19.23■□□□□ 0.67
DDR1-237ENST00000437124 ERO1AQ96HE7 468 aa19.23■□□□□ 0.67
DDR1-237ENST00000437124 PTPN22Q9Y2R2 807 aa19.23■□□□□ 0.67
DDR1-237ENST00000437124 MYH3P11055 1940 aa19.22■□□□□ 0.67
DDR1-237ENST00000437124 FXR1P51114 621 aaKnown RBP eCLIP19.22■□□□□ 0.67
DDR1-237ENST00000437124 EXOSC9Q06265 439 aaKnown RBP19.22■□□□□ 0.67
DDR1-237ENST00000437124 FKBP5Q13451 457 aaPredicted RBP19.22■□□□□ 0.67
DDR1-237ENST00000437124 DNAAF4Q8WXU2 420 aa19.22■□□□□ 0.67
DDR1-237ENST00000437124 SLC10A4Q96EP9 437 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms