RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 LEMD3Q9Y2U8 911 aa26.08■■□□□ 1.77
YBX1-203ENST00000436427 ATP5JP18859 108 aa26.07■■□□□ 1.76
YBX1-203ENST00000436427 GGA1Q9UJY5 639 aa26.07■■□□□ 1.76
YBX1-203ENST00000436427 UFL1O94874 794 aa26.06■■□□□ 1.76
YBX1-203ENST00000436427 ATP2B4P23634 1241 aa26.06■■□□□ 1.76
YBX1-203ENST00000436427 BOLA2Q9H3K6 86 aa26.06■■□□□ 1.76
YBX1-203ENST00000436427 PODXL2Q9NZ53 605 aa26.06■■□□□ 1.76
YBX1-203ENST00000436427 PIM2Q9P1W9 311 aa26.06■■□□□ 1.76
YBX1-203ENST00000436427 TRIM6-TRIM34B2RNG4 842 aa26.05■■□□□ 1.76
YBX1-203ENST00000436427 MAP4K4O95819 1239 aaPredicted RBP26.05■■□□□ 1.76
YBX1-203ENST00000436427 CCDC102BQ68D86 513 aa26.05■■□□□ 1.76
YBX1-203ENST00000436427 MPNDQ8N594 471 aa26.05■■□□□ 1.76
YBX1-203ENST00000436427 CAVIN4Q5BKX8 364 aa26.04■■□□□ 1.76
YBX1-203ENST00000436427 KLRK1P26718 216 aa26.04■■□□□ 1.76
YBX1-203ENST00000436427 PHKA1P46020 1223 aa26.04■■□□□ 1.76
YBX1-203ENST00000436427 DPP8Q6V1X1 898 aaPredicted RBP26.04■■□□□ 1.76
YBX1-203ENST00000436427 WWC3Q9ULE0 1092 aa26.04■■□□□ 1.76
YBX1-203ENST00000436427 C6orf229H3BNL8 230 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 C21orf2O43822 256 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 SDSP20132 328 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 GYG1P46976 350 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 BCAMP50895 628 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 VPS37DQ86XT2 251 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 TBC1D16Q8TBP0 767 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 RILPL2Q969X0 211 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 POLLQ9UGP5 575 aa26.03■■□□□ 1.76
YBX1-203ENST00000436427 LTBP1Q14766 1721 aa26.02■■□□□ 1.76
YBX1-203ENST00000436427 C7orf43Q8WVR3 580 aa26.02■■□□□ 1.76
YBX1-203ENST00000436427 GPR101Q96P66 508 aaPredicted RBP26.02■■□□□ 1.76
YBX1-203ENST00000436427 DNAJC2Q99543 621 aaKnown RBP26.02■■□□□ 1.76
YBX1-203ENST00000436427 UQCRFS1P1P0C7P4 283 aa26.01■■□□□ 1.75
YBX1-203ENST00000436427 DALRD3Q5D0E6 543 aaKnown RBP26.01■■□□□ 1.75
YBX1-203ENST00000436427 NLGN2Q8NFZ4 835 aa26.01■■□□□ 1.75
YBX1-203ENST00000436427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26■■□□□ 1.75
YBX1-203ENST00000436427 FAM84BQ96KN1 310 aaPredicted RBP26■■□□□ 1.75
YBX1-203ENST00000436427 HAUS7Q99871 368 aa26■■□□□ 1.75
YBX1-203ENST00000436427 NDUFB9Q9Y6M9 179 aa26■■□□□ 1.75
YBX1-203ENST00000436427 ARID4AP29374 1257 aaPredicted RBP25.99■■□□□ 1.75
YBX1-203ENST00000436427 CC2D2BQ6DHV5 1058 aa25.99■■□□□ 1.75
YBX1-203ENST00000436427 TXNRD3Q86VQ6 643 aa25.99■■□□□ 1.75
YBX1-203ENST00000436427 CNTROBQ8N137 903 aa25.99■■□□□ 1.75
YBX1-203ENST00000436427 ZNF512BQ96KM6 892 aaPredicted RBP25.99■■□□□ 1.75
YBX1-203ENST00000436427 FHDC1Q9C0D6 1143 aaPredicted RBP25.99■■□□□ 1.75
YBX1-203ENST00000436427 HIBADHP31937 336 aaKnown RBP25.98■■□□□ 1.75
YBX1-203ENST00000436427 SCARF1Q14162 830 aa25.98■■□□□ 1.75
YBX1-203ENST00000436427 SNRKQ9NRH2 765 aa25.98■■□□□ 1.75
YBX1-203ENST00000436427 GNL3LQ9NVN8 582 aaKnown RBP25.98■■□□□ 1.75
YBX1-203ENST00000436427 DUOX1Q9NRD9 1551 aa25.98■■□□□ 1.75
YBX1-203ENST00000436427 BRCA1P38398 1863 aaKnown RBP25.98■■□□□ 1.75
YBX1-203ENST00000436427 IRS2Q9Y4H2 1338 aa25.98■■□□□ 1.75
YBX1-203ENST00000436427 MCAMP43121 646 aa25.98■■□□□ 1.75
YBX1-203ENST00000436427 FKBP4Q02790 459 aaKnown RBP eCLIP25.98■■□□□ 1.75
YBX1-203ENST00000436427 MED23Q9ULK4 1368 aa25.97■■□□□ 1.75
YBX1-203ENST00000436427 CCDC93Q567U6 631 aa25.97■■□□□ 1.75
YBX1-203ENST00000436427 C15orf52Q6ZUT6 534 aaKnown RBP25.97■■□□□ 1.75
YBX1-203ENST00000436427 FBXO33Q7Z6M2 555 aa25.97■■□□□ 1.75
YBX1-203ENST00000436427 IQSEC3Q9UPP2 1182 aaPredicted RBP25.97■■□□□ 1.75
YBX1-203ENST00000436427 PI16Q6UXB8 463 aa25.96■■□□□ 1.75
YBX1-203ENST00000436427 ZNF804AQ7Z570 1209 aa25.96■■□□□ 1.75
YBX1-203ENST00000436427 EVI5LQ96CN4 794 aa25.96■■□□□ 1.75
YBX1-203ENST00000436427 EDC3Q96F86 508 aaKnown RBP25.96■■□□□ 1.75
YBX1-203ENST00000436427 PAG1Q9NWQ8 432 aa25.96■■□□□ 1.75
YBX1-203ENST00000436427 GOLIM4O00461 696 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 RIMBP2O15034 1052 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 RASGRF1Q13972 1273 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 GRIPAP1Q4V328 841 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 SOGA3Q5TF21 947 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 EYA3Q99504 573 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 BCS1LQ9Y276 419 aa25.95■■□□□ 1.74
YBX1-203ENST00000436427 FRAT2O75474 233 aaPredicted RBP25.94■■□□□ 1.74
YBX1-203ENST00000436427 ZAP70P43403 619 aa25.94■■□□□ 1.74
YBX1-203ENST00000436427 RTKN2Q8IZC4 609 aa25.94■■□□□ 1.74
YBX1-203ENST00000436427 SPATA5Q8NB90 893 aa25.94■■□□□ 1.74
YBX1-203ENST00000436427 ZC3H12CQ9C0D7 883 aaKnown RBP25.94■■□□□ 1.74
YBX1-203ENST00000436427 HMG20BQ9P0W2 317 aa25.94■■□□□ 1.74
YBX1-203ENST00000436427 AK9Q5TCS8 1911 aa25.94■■□□□ 1.74
YBX1-203ENST00000436427 CDC45O75419 566 aa25.93■■□□□ 1.74
YBX1-203ENST00000436427 WASHC4Q2M389 1173 aa25.93■■□□□ 1.74
YBX1-203ENST00000436427 C8orf34Q49A92 452 aa25.93■■□□□ 1.74
YBX1-203ENST00000436427 RBM19Q9Y4C8 960 aaKnown RBP25.93■■□□□ 1.74
YBX1-203ENST00000436427 GOLGB1Q14789 3259 aaKnown RBP25.93■■□□□ 1.74
YBX1-203ENST00000436427 SNED1Q8TER0 1413 aa25.93■■□□□ 1.74
YBX1-203ENST00000436427 FSD1Q9BTV5 496 aa25.93■■□□□ 1.74
YBX1-203ENST00000436427 RTFDC1Q9BY42 306 aaPredicted RBP25.93■■□□□ 1.74
YBX1-203ENST00000436427 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
YBX1-203ENST00000436427 AKAP11Q9UKA4 1901 aa25.92■■□□□ 1.74
YBX1-203ENST00000436427 ANTXR1Q9H6X2 564 aa25.91■■□□□ 1.74
YBX1-203ENST00000436427 DENND2AQ9ULE3 1009 aa25.91■■□□□ 1.74
YBX1-203ENST00000436427 SEMA3EO15041 775 aa25.9■■□□□ 1.74
YBX1-203ENST00000436427 CASC1Q6TDU7 716 aa25.9■■□□□ 1.74
YBX1-203ENST00000436427 SYT17Q9BSW7 474 aa25.9■■□□□ 1.74
YBX1-203ENST00000436427 G3V3G9 751 aa25.89■■□□□ 1.74
YBX1-203ENST00000436427 CYP2E1P05181 493 aaPredicted RBP25.89■■□□□ 1.74
YBX1-203ENST00000436427 DCAF8Q5TAQ9 597 aa25.89■■□□□ 1.74
YBX1-203ENST00000436427 TBC1D9Q6ZT07 1266 aa25.89■■□□□ 1.74
YBX1-203ENST00000436427 CD209Q9NNX6 404 aa25.89■■□□□ 1.74
YBX1-203ENST00000436427 COL1A1P02452 1464 aaPredicted RBP25.89■■□□□ 1.73
YBX1-203ENST00000436427 TTF1Q15361 905 aaPredicted RBP25.88■■□□□ 1.73
YBX1-203ENST00000436427 KBTBD3Q8NAB2 608 aa25.88■■□□□ 1.73
YBX1-203ENST00000436427 PSMD1Q99460 953 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms