RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 LTBP3Q9NS15 1303 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 SIAH2O43255 324 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 SH3BP2P78314 561 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 CTC1Q2NKJ3 1217 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 BRIP1Q9BX63 1249 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
NIF3L1-208ENST00000436412 IQCA1LA6NCM1 817 aa11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 STARD3NLO95772 234 aa11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 CTCFP49711 727 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 LYPD8Q6UX82 237 aa11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 AIDAQ96BJ3 306 aa11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 MKRN1Q9UHC7 482 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-208ENST00000436412 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 FER1L6Q2WGJ9 1857 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 AXIN1O15169 862 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 C21orf2O43822 256 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 IL13P35225 146 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 MORC1Q86VD1 984 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 ZNF622Q969S3 477 aaKnown RBP eCLIP11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 TAOK3Q9H2K8 898 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
NIF3L1-208ENST00000436412 PASKQ96RG2 1323 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 MRC1P22897 1456 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 FOXN1O15353 648 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 SLC39A6Q13433 755 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 TUSC1Q2TAM9 212 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 HPS1Q92902 700 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 PANK3Q9H999 370 aa11.4□□□□□ -0.58
NIF3L1-208ENST00000436412 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
NIF3L1-208ENST00000436412 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-208ENST00000436412 QPCTQ16769 361 aa11.39□□□□□ -0.59
NIF3L1-208ENST00000436412 BICDL1Q6ZP65 573 aa11.39□□□□□ -0.59
NIF3L1-208ENST00000436412 TEX13AQ9BXU3 409 aaPredicted RBP11.39□□□□□ -0.59
NIF3L1-208ENST00000436412 SCN4AP35499 1836 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 TMEM88BA6NKF7 163 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 F12P00748 615 aaPredicted RBP11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 CSPP1Q1MSJ5 1256 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 STYK1Q6J9G0 422 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 BAP1Q92560 729 aa11.38□□□□□ -0.59
NIF3L1-208ENST00000436412 LILRB3O75022 631 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 VEGFBP49765 207 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 MASTLQ96GX5 879 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 SETDB2Q96T68 719 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 GMPR2Q9P2T1 348 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 ANKRD31Q8N7Z5 1873 aa11.37□□□□□ -0.59
NIF3L1-208ENST00000436412 NPHP1O15259 732 aa11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 SRGNP10124 158 aa11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 IL6STP40189 918 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 ST5P78524 1137 aa11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 CNBD1Q8NA66 436 aa11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 KNSTRNQ9Y448 316 aa11.36□□□□□ -0.59
NIF3L1-208ENST00000436412 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 PNMA8AQ86V59 439 aaPredicted RBP11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 SLX4Q8IY92 1834 aa11.35□□□□□ -0.59
NIF3L1-208ENST00000436412 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 LBX1P52954 281 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 CCDC93Q567U6 631 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 C7orf43Q8WVR3 580 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 HACL1Q9UJ83 578 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 TBC1D2BQ9UPU7 963 aa11.34□□□□□ -0.59
NIF3L1-208ENST00000436412 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 HMOX1P09601 288 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 RTKN2Q8IZC4 609 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
NIF3L1-208ENST00000436412 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms