RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 GREM2Q9H772 168 aa17.54■□□□□ 0.4
LINC00028-201ENST00000435497 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
LINC00028-201ENST00000435497 PAPPA2Q9BXP8 1791 aa17.53■□□□□ 0.4
LINC00028-201ENST00000435497 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
LINC00028-201ENST00000435497 CALD1Q05682 793 aaKnown RBP17.53■□□□□ 0.4
LINC00028-201ENST00000435497 DACT2Q5SW24 774 aa17.53■□□□□ 0.4
LINC00028-201ENST00000435497 CTU1Q7Z7A3 348 aaKnown RBP17.53■□□□□ 0.4
LINC00028-201ENST00000435497 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
LINC00028-201ENST00000435497 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
LINC00028-201ENST00000435497 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
LINC00028-201ENST00000435497 ZNF646O15015 1829 aaPredicted RBP17.52■□□□□ 0.4
LINC00028-201ENST00000435497 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.4
LINC00028-201ENST00000435497 MED23Q9ULK4 1368 aa17.52■□□□□ 0.39
LINC00028-201ENST00000435497 WNT10BO00744 389 aa17.51■□□□□ 0.39
LINC00028-201ENST00000435497 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
LINC00028-201ENST00000435497 MYH3P11055 1940 aa17.51■□□□□ 0.39
LINC00028-201ENST00000435497 SPEF2Q9C093 1822 aa17.5■□□□□ 0.39
LINC00028-201ENST00000435497 H7C1W4 665 aa17.5■□□□□ 0.39
LINC00028-201ENST00000435497 TBC1D8O95759 1140 aa17.5■□□□□ 0.39
LINC00028-201ENST00000435497 STRIP1Q5VSL9 837 aa17.5■□□□□ 0.39
LINC00028-201ENST00000435497 G2E3Q7L622 706 aa17.5■□□□□ 0.39
LINC00028-201ENST00000435497 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
LINC00028-201ENST00000435497 TM4SF4P48230 202 aa17.49■□□□□ 0.39
LINC00028-201ENST00000435497 ZNF296Q8WUU4 475 aaPredicted RBP17.49■□□□□ 0.39
LINC00028-201ENST00000435497 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
LINC00028-201ENST00000435497 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
LINC00028-201ENST00000435497 KLRK1P26718 216 aa17.48■□□□□ 0.39
LINC00028-201ENST00000435497 OGFOD1Q8N543 542 aa17.48■□□□□ 0.39
LINC00028-201ENST00000435497 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
LINC00028-201ENST00000435497 HPS5Q9UPZ3 1129 aa17.48■□□□□ 0.39
LINC00028-201ENST00000435497 LEMD3Q9Y2U8 911 aa17.48■□□□□ 0.39
LINC00028-201ENST00000435497 SASH1O94885 1247 aa17.47■□□□□ 0.39
LINC00028-201ENST00000435497 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
LINC00028-201ENST00000435497 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
LINC00028-201ENST00000435497 TTLL5Q6EMB2 1281 aa17.47■□□□□ 0.39
LINC00028-201ENST00000435497 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
LINC00028-201ENST00000435497 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
LINC00028-201ENST00000435497 ZBED3Q96IU2 234 aaPredicted RBP17.47■□□□□ 0.39
LINC00028-201ENST00000435497 MYO3BQ8WXR4 1341 aa17.47■□□□□ 0.39
LINC00028-201ENST00000435497 CASP7P55210 303 aa17.46■□□□□ 0.39
LINC00028-201ENST00000435497 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
LINC00028-201ENST00000435497 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
LINC00028-201ENST00000435497 PLA2G12BQ9BX93 195 aa17.46■□□□□ 0.39
LINC00028-201ENST00000435497 R3HDMLQ9H3Y0 253 aa17.46■□□□□ 0.39
LINC00028-201ENST00000435497 ZNF804BA4D1E1 1349 aa17.46■□□□□ 0.38
LINC00028-201ENST00000435497 GPR25O00155 361 aa17.45■□□□□ 0.38
LINC00028-201ENST00000435497 CSF1RP07333 972 aa17.45■□□□□ 0.38
LINC00028-201ENST00000435497 ITGA6P23229 1130 aa17.45■□□□□ 0.38
LINC00028-201ENST00000435497 PKN2Q16513 984 aaKnown RBP17.45■□□□□ 0.38
LINC00028-201ENST00000435497 HDAC9Q9UKV0 1011 aa17.45■□□□□ 0.38
LINC00028-201ENST00000435497 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
LINC00028-201ENST00000435497 MMP14P50281 582 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 GTF2IP78347 998 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 PRKG1Q13976 671 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 GCKRQ14397 625 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
LINC00028-201ENST00000435497 LDLRAD1Q5T700 205 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 KIAA0825Q8IV33 1275 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
LINC00028-201ENST00000435497 SNAP23O00161 211 aa17.43■□□□□ 0.38
LINC00028-201ENST00000435497 NF2P35240 595 aa17.43■□□□□ 0.38
LINC00028-201ENST00000435497 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
LINC00028-201ENST00000435497 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
LINC00028-201ENST00000435497 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
LINC00028-201ENST00000435497 FZD1Q9UP38 647 aa17.43■□□□□ 0.38
LINC00028-201ENST00000435497 IRS2Q9Y4H2 1338 aa17.43■□□□□ 0.38
LINC00028-201ENST00000435497 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
LINC00028-201ENST00000435497 CFHR5Q9BXR6 569 aa17.42■□□□□ 0.38
LINC00028-201ENST00000435497 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
LINC00028-201ENST00000435497 CHRNDQ07001 517 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 SPRYD7Q5W111 196 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 APOBEC3FQ8IUX4 373 aaKnown RBP17.41■□□□□ 0.38
LINC00028-201ENST00000435497 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 CERS5Q8N5B7 392 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 PCDH10Q9P2E7 1040 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
LINC00028-201ENST00000435497 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
LINC00028-201ENST00000435497 FLIIQ13045 1269 aa17.4■□□□□ 0.38
LINC00028-201ENST00000435497 DEFB129Q9H1M3 183 aa17.4■□□□□ 0.38
LINC00028-201ENST00000435497 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
LINC00028-201ENST00000435497 FKTNO75072 461 aa17.39■□□□□ 0.37
LINC00028-201ENST00000435497 TAF5LO75529 589 aa17.39■□□□□ 0.37
LINC00028-201ENST00000435497 FBXO46Q6PJ61 603 aaPredicted RBP17.39■□□□□ 0.37
LINC00028-201ENST00000435497 MTMR14Q8NCE2 650 aa17.39■□□□□ 0.37
LINC00028-201ENST00000435497 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
LINC00028-201ENST00000435497 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
LINC00028-201ENST00000435497 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
LINC00028-201ENST00000435497 MAP3K11Q16584 847 aa17.38■□□□□ 0.37
LINC00028-201ENST00000435497 PRPF38BQ5VTL8 546 aaKnown RBP17.38■□□□□ 0.37
LINC00028-201ENST00000435497 C15orf52Q6ZUT6 534 aaKnown RBP17.38■□□□□ 0.37
LINC00028-201ENST00000435497 LINS1Q8NG48 757 aa17.38■□□□□ 0.37
LINC00028-201ENST00000435497 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 KCNJ4P48050 445 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 FOXO4P98177 505 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
LINC00028-201ENST00000435497 SLC10A4Q96EP9 437 aa17.37■□□□□ 0.37
LINC00028-201ENST00000435497 CLMNQ96JQ2 1002 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms