RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
TREX1-201ENST00000433541 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
TREX1-201ENST00000433541 CEP85Q6P2H3 762 aa19.24■□□□□ 0.67
TREX1-201ENST00000433541 SCN9AQ15858 1988 aa19.24■□□□□ 0.67
TREX1-201ENST00000433541 PSME4Q14997 1843 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 WDR90Q96KV7 1748 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 HMMRO75330 724 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 IFIT1P09914 478 aaKnown RBP19.23■□□□□ 0.67
TREX1-201ENST00000433541 CXCL9Q07325 125 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 PUM3Q15397 648 aaKnown RBP19.23■□□□□ 0.67
TREX1-201ENST00000433541 COA1Q9GZY4 146 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 SCN4AP35499 1836 aa19.23■□□□□ 0.67
TREX1-201ENST00000433541 YDJCA8MPS7 323 aa19.22■□□□□ 0.67
TREX1-201ENST00000433541 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
TREX1-201ENST00000433541 SLC5A1P13866 664 aa19.22■□□□□ 0.67
TREX1-201ENST00000433541 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
TREX1-201ENST00000433541 ATG9AQ7Z3C6 839 aa19.22■□□□□ 0.67
TREX1-201ENST00000433541 TXNRD3Q86VQ6 643 aa19.22■□□□□ 0.67
TREX1-201ENST00000433541 IQCA1LA6NCM1 817 aa19.21■□□□□ 0.67
TREX1-201ENST00000433541 FRAT2O75474 233 aaPredicted RBP19.21■□□□□ 0.67
TREX1-201ENST00000433541 VEGFAP15692 232 aaPredicted RBP19.21■□□□□ 0.67
TREX1-201ENST00000433541 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
TREX1-201ENST00000433541 PODNQ7Z5L7 613 aa19.21■□□□□ 0.67
TREX1-201ENST00000433541 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
TREX1-201ENST00000433541 CRBNQ96SW2 442 aa19.21■□□□□ 0.67
TREX1-201ENST00000433541 PSMD14O00487 310 aa19.2■□□□□ 0.66
TREX1-201ENST00000433541 GYG1P46976 350 aa19.2■□□□□ 0.66
TREX1-201ENST00000433541 POLA2Q14181 598 aa19.2■□□□□ 0.66
TREX1-201ENST00000433541 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
TREX1-201ENST00000433541 HIBADHP31937 336 aaKnown RBP19.19■□□□□ 0.66
TREX1-201ENST00000433541 TFCP2Q12800 502 aa19.19■□□□□ 0.66
TREX1-201ENST00000433541 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
TREX1-201ENST00000433541 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
TREX1-201ENST00000433541 KCNQ5Q9NR82 932 aa19.19■□□□□ 0.66
TREX1-201ENST00000433541 HACL1Q9UJ83 578 aa19.19■□□□□ 0.66
TREX1-201ENST00000433541 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
TREX1-201ENST00000433541 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
TREX1-201ENST00000433541 GMPSP49915 693 aaPredicted RBP19.18■□□□□ 0.66
TREX1-201ENST00000433541 EAPPQ56P03 285 aaPredicted RBP19.18■□□□□ 0.66
TREX1-201ENST00000433541 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
TREX1-201ENST00000433541 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
TREX1-201ENST00000433541 LPIN2Q92539 896 aa19.18■□□□□ 0.66
TREX1-201ENST00000433541 CD209Q9NNX6 404 aa19.18■□□□□ 0.66
TREX1-201ENST00000433541 AKAP2Q9Y2D5 859 aa19.18■□□□□ 0.66
TREX1-201ENST00000433541 ARAP2Q8WZ64 1704 aa19.17■□□□□ 0.66
TREX1-201ENST00000433541 APBB1O00213 710 aa19.17■□□□□ 0.66
TREX1-201ENST00000433541 GTF2IP78347 998 aa19.17■□□□□ 0.66
TREX1-201ENST00000433541 L3MBTL3Q96JM7 780 aaPredicted RBP19.17■□□□□ 0.66
TREX1-201ENST00000433541 NEUROD6Q96NK8 337 aa19.17■□□□□ 0.66
TREX1-201ENST00000433541 IQSEC3Q9UPP2 1182 aaPredicted RBP19.17■□□□□ 0.66
TREX1-201ENST00000433541 EXOC6BQ9Y2D4 811 aa19.17■□□□□ 0.66
TREX1-201ENST00000433541 ZBTB12Q9Y330 459 aaPredicted RBP19.17■□□□□ 0.66
TREX1-201ENST00000433541 HSP90AB4PQ58FF6 505 aa19.16■□□□□ 0.66
TREX1-201ENST00000433541 GORABQ5T7V8 394 aa19.16■□□□□ 0.66
TREX1-201ENST00000433541 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
TREX1-201ENST00000433541 EPHX2P34913 555 aa19.15■□□□□ 0.66
TREX1-201ENST00000433541 FAM84BQ96KN1 310 aaPredicted RBP19.15■□□□□ 0.66
TREX1-201ENST00000433541 JAG2Q9Y219 1238 aa19.15■□□□□ 0.66
TREX1-201ENST00000433541 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
TREX1-201ENST00000433541 A0A1B0GUL7 405 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 H7C1D1 291 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 KIF3CO14782 793 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 FGFR2P21802 821 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 RPS12P25398 132 aaKnown RBP19.14■□□□□ 0.65
TREX1-201ENST00000433541 BCAMP50895 628 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 SCNN1DP51172 638 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
TREX1-201ENST00000433541 CHAF1AQ13111 956 aaPredicted RBP19.14■□□□□ 0.65
TREX1-201ENST00000433541 RSBN1LQ6PCB5 846 aaPredicted RBP19.14■□□□□ 0.65
TREX1-201ENST00000433541 ERC1Q8IUD2 1116 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 GNL3LQ9NVN8 582 aaKnown RBP19.14■□□□□ 0.65
TREX1-201ENST00000433541 GPRC5DQ9NZD1 345 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 IRS2Q9Y4H2 1338 aa19.14■□□□□ 0.65
TREX1-201ENST00000433541 VIL1P09327 827 aaKnown RBP19.13■□□□□ 0.65
TREX1-201ENST00000433541 EPS15P42566 896 aa19.13■□□□□ 0.65
TREX1-201ENST00000433541 TIMM10P62072 90 aa19.13■□□□□ 0.65
TREX1-201ENST00000433541 STRIP1Q5VSL9 837 aa19.13■□□□□ 0.65
TREX1-201ENST00000433541 MICALL2Q8IY33 904 aa19.13■□□□□ 0.65
TREX1-201ENST00000433541 TAF1DQ9H5J8 278 aaPredicted RBP19.13■□□□□ 0.65
TREX1-201ENST00000433541 CNOT7Q9UIV1 285 aaKnown RBP19.13■□□□□ 0.65
TREX1-201ENST00000433541 ZNF609O15014 1411 aa19.12■□□□□ 0.65
TREX1-201ENST00000433541 MYO3BQ8WXR4 1341 aa19.12■□□□□ 0.65
TREX1-201ENST00000433541 POTECB2RU33 542 aa19.12■□□□□ 0.65
TREX1-201ENST00000433541 SASH1O94885 1247 aa19.12■□□□□ 0.65
TREX1-201ENST00000433541 IL1R1P14778 569 aa19.12■□□□□ 0.65
TREX1-201ENST00000433541 PNMA8AQ86V59 439 aaPredicted RBP19.12■□□□□ 0.65
TREX1-201ENST00000433541 MXD3Q9BW11 206 aa19.12■□□□□ 0.65
TREX1-201ENST00000433541 NOP58Q9Y2X3 529 aaKnown RBP19.12■□□□□ 0.65
TREX1-201ENST00000433541 ZNF646O15015 1829 aaPredicted RBP19.11■□□□□ 0.65
TREX1-201ENST00000433541 ADORA1P30542 326 aa19.11■□□□□ 0.65
TREX1-201ENST00000433541 DACT2Q5SW24 774 aa19.11■□□□□ 0.65
TREX1-201ENST00000433541 RBM26Q5T8P6 1007 aaKnown RBP19.11■□□□□ 0.65
TREX1-201ENST00000433541 SIRT2Q8IXJ6 389 aa19.11■□□□□ 0.65
TREX1-201ENST00000433541 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
TREX1-201ENST00000433541 AGBL3Q8NEM8 1001 aa19.11■□□□□ 0.65
TREX1-201ENST00000433541 DPF2Q92785 391 aa19.11■□□□□ 0.65
TREX1-201ENST00000433541 ADARB2Q9NS39 739 aaKnown RBP19.11■□□□□ 0.65
TREX1-201ENST00000433541 TOMM70O94826 608 aa19.1■□□□□ 0.65
TREX1-201ENST00000433541 TNNI3KQ59H18 835 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms