RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 ABT1Q9ULW3 272 aaKnown RBP12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PSMD14O00487 310 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PDE8AO60658 829 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 DPF2Q92785 391 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 DBNDD1Q9H9R9 158 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 WBP1LQ9NX94 342 aa12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 CNOT7Q9UIV1 285 aaKnown RBP12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
CDC42-IT1-201ENST00000431803 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 SHTN1A0MZ66 631 aa12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 ECE2O60344 883 aa12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 GPR101Q96P66 508 aaPredicted RBP12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 EYA3Q99504 573 aa12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 TLL2Q9Y6L7 1015 aa12.1□□□□□ -0.47
CDC42-IT1-201ENST00000431803 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 CTSWP56202 376 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 KCNQ5Q9NR82 932 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 ZNF609O15014 1411 aa12.09□□□□□ -0.47
CDC42-IT1-201ENST00000431803 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 H7C1D1 291 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 UFL1O94874 794 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 G2E3Q7L622 706 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 SAPCD2Q86UD0 394 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 AIDAQ96BJ3 306 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 FANCIQ9NVI1 1328 aa12.08□□□□□ -0.48
CDC42-IT1-201ENST00000431803 MYH3P11055 1940 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 EGFRP00533 1210 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ECE1P42892 770 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 MAP2K1Q02750 393 aaPredicted RBP12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CWF19L2Q2TBE0 894 aaKnown RBP12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CYP4F22Q6NT55 531 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CDC37L1Q7L3B6 337 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ZC3H12CQ9C0D7 883 aaKnown RBP12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 XDHP47989 1333 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 PSME4Q14997 1843 aa12.07□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ANP32CO43423 234 aa12.06□□□□□ -0.48
CDC42-IT1-201ENST00000431803 VIL1P09327 827 aaKnown RBP12.06□□□□□ -0.48
CDC42-IT1-201ENST00000431803 FLIIQ13045 1269 aa12.06□□□□□ -0.48
CDC42-IT1-201ENST00000431803 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
CDC42-IT1-201ENST00000431803 GREM2Q9H772 168 aa12.06□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 H7C1W4 665 aa12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 HSPA8P11142 646 aaKnown RBP12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 TBC1D10BQ4KMP7 808 aaPredicted RBP12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 PLA2G12BQ9BX93 195 aa12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
CDC42-IT1-201ENST00000431803 C2orf72A6NCS6 295 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ATP2B4P23634 1241 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 MAP2K2P36507 400 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 LBX1P52954 281 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 CASP7P55210 303 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 GCKRQ14397 625 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 UBE3BQ7Z3V4 1068 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
CDC42-IT1-201ENST00000431803 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms