RNA–Protein interactions for RNA: ENST00000431311.1

LINC01343-201, Transcript of long intergenic non-protein coding RNA 1343, humanhuman

TSL 3 BASIC

Gene LINC01343, Length 2,283 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01343-201ENST00000431311 SPATA32Q96LK8 384 aa12.42□□□□□ -0.42
LINC01343-201ENST00000431311 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
LINC01343-201ENST00000431311 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
LINC01343-201ENST00000431311 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
LINC01343-201ENST00000431311 MORC2Q9Y6X9 1032 aaPredicted RBP12.42□□□□□ -0.42
LINC01343-201ENST00000431311 FAM173BQ6P4H8 233 aa12.42□□□□□ -0.42
LINC01343-201ENST00000431311 METTL3Q86U44 580 aaKnown RBP12.42□□□□□ -0.42
LINC01343-201ENST00000431311 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
LINC01343-201ENST00000431311 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
LINC01343-201ENST00000431311 IGSF3O75054 1194 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 CAVIN2O95810 425 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 PSMA5P28066 241 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 ZNF165P49910 485 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 CREB3L3Q68CJ9 461 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 LEO1Q8WVC0 666 aaPredicted RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 RBM8AQ9Y5S9 174 aaKnown RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 NBPF7P0C2Y1 421 aaPredicted RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 ANKRD1Q15327 319 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 CLASRPQ8N2M8 674 aaKnown RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 GPATCH3Q96I76 525 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
LINC01343-201ENST00000431311 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
LINC01343-201ENST00000431311 NEMFO60524 1076 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
LINC01343-201ENST00000431311 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
LINC01343-201ENST00000431311 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 DNAJC25Q9H1X3 360 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 LGR6Q9HBX8 967 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 SARM1Q6SZW1 724 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
LINC01343-201ENST00000431311 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
LINC01343-201ENST00000431311 MAP4K1Q92918 833 aa12.4□□□□□ -0.42
LINC01343-201ENST00000431311 ALDH8A1Q9H2A2 487 aaPredicted RBP12.4□□□□□ -0.42
LINC01343-201ENST00000431311 HIP1O00291 1037 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 NR1I2O75469 434 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 SLFN14P0C7P3 912 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 KCNJ4P48050 445 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 ZC3H6P61129 1189 aaKnown RBP12.39□□□□□ -0.43
LINC01343-201ENST00000431311 RBM6P78332 1123 aaKnown RBP12.39□□□□□ -0.43
LINC01343-201ENST00000431311 BEND3Q5T5X7 828 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 LRRC8AQ8IWT6 810 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 XIRP1Q702N8 1843 aaKnown RBP12.39□□□□□ -0.43
LINC01343-201ENST00000431311 SLC27A2O14975 620 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 GIGYF1O75420 1035 aaPredicted RBP12.39□□□□□ -0.43
LINC01343-201ENST00000431311 C7P10643 843 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 MTX1Q13505 466 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
LINC01343-201ENST00000431311 BLOC1S2Q6QNY1 142 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 DNAAF4Q8WXU2 420 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 SNRKQ9NRH2 765 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 POLR3EQ9NVU0 708 aa12.39□□□□□ -0.43
LINC01343-201ENST00000431311 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
LINC01343-201ENST00000431311 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
LINC01343-201ENST00000431311 CCDC82Q8N4S0 544 aa12.38□□□□□ -0.43
LINC01343-201ENST00000431311 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
LINC01343-201ENST00000431311 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
LINC01343-201ENST00000431311 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
LINC01343-201ENST00000431311 ERBB3P21860 1342 aa12.38□□□□□ -0.43
LINC01343-201ENST00000431311 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
LINC01343-201ENST00000431311 RPS6KB1P23443 525 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 IQCB1Q15051 598 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 NMIQ13287 307 aaPredicted RBP12.37□□□□□ -0.43
LINC01343-201ENST00000431311 TOB2Q14106 344 aaPredicted RBP12.37□□□□□ -0.43
LINC01343-201ENST00000431311 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
LINC01343-201ENST00000431311 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 PXDNQ92626 1479 aa12.37□□□□□ -0.43
LINC01343-201ENST00000431311 TERF2Q15554 542 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 SLFNL1Q499Z3 407 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
LINC01343-201ENST00000431311 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 ERO1AQ96HE7 468 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 FAM227BQ96M60 508 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 FAM53CQ9NYF3 392 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 JCADQ9P266 1359 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 PI4KAP2A4QPH2 592 aa12.36□□□□□ -0.43
LINC01343-201ENST00000431311 USP27XA6NNY8 438 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms