RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 WTIPA6NIX2 430 aaPredicted RBP12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 BEND3Q5T5X7 828 aa12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 SAPCD2Q86UD0 394 aa12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
HMGN1P38-201ENST00000431116 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 ADM5C9JUS6 153 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 CSF1RP07333 972 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 MAP2K1Q02750 393 aaPredicted RBP12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 DCPSQ96C86 337 aaKnown RBP12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 ANKRD2Q9GZV1 360 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 GGA3Q9NZ52 723 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
HMGN1P38-201ENST00000431116 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 USP17L3A6NCW0 530 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 USP17L4A6NCW7 530 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 KLRK1P26718 216 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 ZNF280AP59817 542 aaPredicted RBP12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 USP17L1Q7RTZ2 530 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 LEMD3Q9Y2U8 911 aa12.89□□□□□ -0.35
HMGN1P38-201ENST00000431116 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 GRM8O00222 908 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 KCNJ4P48050 445 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 LBX1P52954 281 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 SULF1Q8IWU6 871 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 PRDM10Q9NQV6 1147 aa12.88□□□□□ -0.35
HMGN1P38-201ENST00000431116 AOC2O75106 756 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 HSPA8P11142 646 aaKnown RBP12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 HUNKP57058 714 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 FOXO4P98177 505 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 CHRNDQ07001 517 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 GMLQ99445 158 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 BEGAINQ9BUH8 593 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 COA1Q9GZY4 146 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 MYOZ2Q9NPC6 264 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 MYO3BQ8WXR4 1341 aa12.87□□□□□ -0.35
HMGN1P38-201ENST00000431116 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 MAP2K2P36507 400 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 SCARF1Q14162 830 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 GBA2Q9HCG7 927 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P38-201ENST00000431116 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
HMGN1P38-201ENST00000431116 E9PSI1 815 aa12.85□□□□□ -0.35
HMGN1P38-201ENST00000431116 TAF5LO75529 589 aa12.85□□□□□ -0.35
HMGN1P38-201ENST00000431116 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
HMGN1P38-201ENST00000431116 CDCA5Q96FF9 252 aa12.85□□□□□ -0.35
HMGN1P38-201ENST00000431116 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
HMGN1P38-201ENST00000431116 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
HMGN1P38-201ENST00000431116 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
HMGN1P38-201ENST00000431116 OGFOD1Q8N543 542 aa12.84□□□□□ -0.35
HMGN1P38-201ENST00000431116 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
HMGN1P38-201ENST00000431116 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
HMGN1P38-201ENST00000431116 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 SNAP23O00161 211 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 GTF2IP78347 998 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 NOGQ13253 232 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 CNNM1Q9NRU3 951 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 TSKSQ9UJT2 592 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 PITPNM2Q9BZ72 1349 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
HMGN1P38-201ENST00000431116 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 SASH1O94885 1247 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 LDHAL6AQ6ZMR3 332 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 KIAA0825Q8IV33 1275 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 CD209Q9NNX6 404 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 SCAF8Q9UPN6 1271 aaKnown RBP12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 PTPRCP08575 1304 aa12.82□□□□□ -0.36
HMGN1P38-201ENST00000431116 WNT10BO00744 389 aa12.81□□□□□ -0.36
HMGN1P38-201ENST00000431116 PLIN1O60240 522 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms