RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ABCC12Q96J65 1359 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 EYA2O00167 538 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 IL15P40933 162 aaPredicted RBP10.49□□□□□ -0.73
NUP98-207ENST00000429801 DDR1Q08345 913 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
NUP98-207ENST00000429801 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
NUP98-207ENST00000429801 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
NUP98-207ENST00000429801 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
NUP98-207ENST00000429801 SASH1O94885 1247 aa10.48□□□□□ -0.73
NUP98-207ENST00000429801 MMP10P09238 476 aa10.48□□□□□ -0.73
NUP98-207ENST00000429801 LDHAL6AQ6ZMR3 332 aa10.48□□□□□ -0.73
NUP98-207ENST00000429801 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
NUP98-207ENST00000429801 GRPEL1Q9HAV7 217 aa10.48□□□□□ -0.73
NUP98-207ENST00000429801 IL1RAPL2Q9NP60 686 aa10.48□□□□□ -0.73
NUP98-207ENST00000429801 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 PSMD1Q99460 953 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 IGHMBP2P38935 993 aaKnown RBP10.47□□□□□ -0.73
NUP98-207ENST00000429801 MSL1Q68DK7 614 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
NUP98-207ENST00000429801 ATG9AQ7Z3C6 839 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 MPHOSPH8Q99549 860 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 CNNM1Q9NRU3 951 aa10.47□□□□□ -0.73
NUP98-207ENST00000429801 HMGB1P09429 215 aaKnown RBP10.46□□□□□ -0.73
NUP98-207ENST00000429801 LRRC24Q50LG9 513 aa10.46□□□□□ -0.73
NUP98-207ENST00000429801 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.73
NUP98-207ENST00000429801 C16orf71Q8IYS4 520 aaPredicted RBP10.46□□□□□ -0.73
NUP98-207ENST00000429801 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.74
NUP98-207ENST00000429801 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.74
NUP98-207ENST00000429801 TFCP2Q12800 502 aa10.46□□□□□ -0.74
NUP98-207ENST00000429801 DDX46Q7L014 1031 aaKnown RBP10.46□□□□□ -0.74
NUP98-207ENST00000429801 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.74
NUP98-207ENST00000429801 PLEKHM2Q8IWE5 1019 aa10.46□□□□□ -0.74
NUP98-207ENST00000429801 PUS3Q9BZE2 481 aaKnown RBP10.46□□□□□ -0.74
NUP98-207ENST00000429801 SEC31BQ9NQW1 1179 aa10.46□□□□□ -0.74
NUP98-207ENST00000429801 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.74
NUP98-207ENST00000429801 ZNF500O60304 480 aaPredicted RBP10.45□□□□□ -0.74
NUP98-207ENST00000429801 MX1P20591 662 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 NBPF20Q3BBV1 942 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 BRIP1Q9BX63 1249 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 GPR108Q9NPR9 543 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 RIPOR2Q9Y4F9 1068 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 MROH5Q6ZUA9 1318 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 NRXN2Q9P2S2 1712 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 AACSQ86V21 672 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 RPGRQ92834 1020 aaKnown RBP10.45□□□□□ -0.74
NUP98-207ENST00000429801 GPATCH3Q96I76 525 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 OSBPL3Q9H4L5 887 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 AKAP2Q9Y2D5 859 aa10.45□□□□□ -0.74
NUP98-207ENST00000429801 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
NUP98-207ENST00000429801 TULP2O00295 520 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 CRY2Q49AN0 593 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 TNNI3KQ59H18 835 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 METTL24Q5JXM2 366 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 ZSCAN30Q86W11 494 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 OTUD7AQ8TE49 926 aaPredicted RBP10.44□□□□□ -0.74
NUP98-207ENST00000429801 TSC1Q92574 1164 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 FPGT-TNNI3KV9GXZ4 949 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 PDE6BP35913 854 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 PDE1AP54750 535 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 ZNF710Q8N1W2 664 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 EAF2Q96CJ1 260 aaPredicted RBP10.44□□□□□ -0.74
NUP98-207ENST00000429801 RBM17Q96I25 401 aaKnown RBP10.44□□□□□ -0.74
NUP98-207ENST00000429801 PDGFDQ9GZP0 370 aaPredicted RBP10.44□□□□□ -0.74
NUP98-207ENST00000429801 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
NUP98-207ENST00000429801 STAP2Q9UGK3 403 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 SALL3Q9BXA9 1300 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 LRP5O75197 1615 aa10.44□□□□□ -0.74
NUP98-207ENST00000429801 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
NUP98-207ENST00000429801 AOX1Q06278 1338 aa10.43□□□□□ -0.74
NUP98-207ENST00000429801 TNRC6CQ9HCJ0 1690 aaKnown RBP10.43□□□□□ -0.74
NUP98-207ENST00000429801 CASZ1Q86V15 1759 aa10.43□□□□□ -0.74
NUP98-207ENST00000429801 TTC41PQ6P2S7 1318 aa10.43□□□□□ -0.74
NUP98-207ENST00000429801 GOLIM4O00461 696 aa10.43□□□□□ -0.74
NUP98-207ENST00000429801 BMP2KLQ5H9B9 411 aa10.43□□□□□ -0.74
NUP98-207ENST00000429801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.43□□□□□ -0.74
NUP98-207ENST00000429801 ERC2O15083 957 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 PDE8BO95263 885 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 GRAPQ13588 217 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 R3HDM1Q15032 1099 aaKnown RBP10.42□□□□□ -0.74
NUP98-207ENST00000429801 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 GRAPLQ8TC17 118 aaPredicted RBP10.42□□□□□ -0.74
NUP98-207ENST00000429801 CELF1Q92879 486 aaKnown RBP10.42□□□□□ -0.74
NUP98-207ENST00000429801 CCDC8Q9H0W5 538 aaPredicted RBP10.42□□□□□ -0.74
NUP98-207ENST00000429801 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
NUP98-207ENST00000429801 ECHDC1Q9NTX5 307 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 HOXA10P31260 410 aaPredicted RBP10.42□□□□□ -0.74
NUP98-207ENST00000429801 NEUROD6Q96NK8 337 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 MTFR1LQ9H019 292 aa10.42□□□□□ -0.74
NUP98-207ENST00000429801 A0A1B0GUL7 405 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 ANAPC15P60006 121 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 VGLL2Q8N8G2 317 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 TRERF1Q96PN7 1200 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 ZNF609O15014 1411 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 NPR1P16066 1061 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 POLD1P28340 1107 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 TIMM10P62072 90 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 CHRNDQ07001 517 aa10.41□□□□□ -0.74
NUP98-207ENST00000429801 PUM3Q15397 648 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms