RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
CECR3-201ENST00000428828 HMGN5P82970 282 aaKnown RBP13.72□□□□□ -0.21
CECR3-201ENST00000428828 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
CECR3-201ENST00000428828 LRRC24Q50LG9 513 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 DCTPP1Q9H773 170 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 COPRSQ9NQ92 184 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 CNNM1Q9NRU3 951 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 LDHAL6AQ6ZMR3 332 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
CECR3-201ENST00000428828 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
CECR3-201ENST00000428828 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 KLRG2A4D1S0 409 aaPredicted RBP13.71□□□□□ -0.21
CECR3-201ENST00000428828 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
CECR3-201ENST00000428828 NPR1P16066 1061 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 SLC20A2Q08357 652 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 GRAPQ13588 217 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 GRAPLQ8TC17 118 aaPredicted RBP13.71□□□□□ -0.21
CECR3-201ENST00000428828 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 MASTLQ96GX5 879 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 CCDC39Q9UFE4 941 aa13.71□□□□□ -0.21
CECR3-201ENST00000428828 LRRC37AA6NMS7 1700 aa13.71□□□□□ -0.22
CECR3-201ENST00000428828 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
CECR3-201ENST00000428828 EYA2O00167 538 aa13.7□□□□□ -0.22
CECR3-201ENST00000428828 DPEP1P16444 411 aa13.7□□□□□ -0.22
CECR3-201ENST00000428828 RPS8P62241 208 aaKnown RBP13.7□□□□□ -0.22
CECR3-201ENST00000428828 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
CECR3-201ENST00000428828 IL1RAPL2Q9NP60 686 aa13.7□□□□□ -0.22
CECR3-201ENST00000428828 PRDM10Q9NQV6 1147 aa13.7□□□□□ -0.22
CECR3-201ENST00000428828 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
CECR3-201ENST00000428828 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
CECR3-201ENST00000428828 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
CECR3-201ENST00000428828 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
CECR3-201ENST00000428828 PPEF1O14829 653 aaPredicted RBP13.68□□□□□ -0.22
CECR3-201ENST00000428828 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
CECR3-201ENST00000428828 TFCP2Q12800 502 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 CRAMP1Q96RY5 1269 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 LRRCC1Q9C099 1032 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
CECR3-201ENST00000428828 ARAP2Q8WZ64 1704 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 CIAO1O76071 339 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 SASH1O94885 1247 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 ALDH1B1P30837 517 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 IL15P40933 162 aaPredicted RBP13.68□□□□□ -0.22
CECR3-201ENST00000428828 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 ERC1Q8IUD2 1116 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 NLGN2Q8NFZ4 835 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
CECR3-201ENST00000428828 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
CECR3-201ENST00000428828 TAF5LO75529 589 aa13.67□□□□□ -0.22
CECR3-201ENST00000428828 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
CECR3-201ENST00000428828 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
CECR3-201ENST00000428828 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
CECR3-201ENST00000428828 BSDC1Q9NW68 430 aaPredicted RBP13.67□□□□□ -0.22
CECR3-201ENST00000428828 RIPOR2Q9Y4F9 1068 aa13.67□□□□□ -0.22
CECR3-201ENST00000428828 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
CECR3-201ENST00000428828 MYH13Q9UKX3 1938 aa13.67□□□□□ -0.22
CECR3-201ENST00000428828 TGFB2P61812 414 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 CHRNDQ07001 517 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 OLFM4Q6UX06 510 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 ARFGEF1Q9Y6D6 1849 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 LTBP1Q14766 1721 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 MROH5Q6ZUA9 1318 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 KCNA3P22001 575 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 CNKSR1Q969H4 720 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
CECR3-201ENST00000428828 NUCB1Q02818 461 aa13.65□□□□□ -0.22
CECR3-201ENST00000428828 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
CECR3-201ENST00000428828 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
CECR3-201ENST00000428828 ZNF609O15014 1411 aa13.65□□□□□ -0.22
CECR3-201ENST00000428828 SNAP23O00161 211 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 BBOX1O75936 387 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 AACSQ86V21 672 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
CECR3-201ENST00000428828 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 ANKIB1Q9P2G1 1089 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 AK9Q5TCS8 1911 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
CECR3-201ENST00000428828 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
CECR3-201ENST00000428828 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
CECR3-201ENST00000428828 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 PDE8BO95263 885 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 OTUD7AQ8TE49 926 aaPredicted RBP13.63□□□□□ -0.23
CECR3-201ENST00000428828 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 FEZ1Q99689 392 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 NSFL1CQ9UNZ2 370 aaKnown RBP13.63□□□□□ -0.23
CECR3-201ENST00000428828 DDX49Q9Y6V7 483 aaKnown RBP13.63□□□□□ -0.23
CECR3-201ENST00000428828 FPGT-TNNI3KV9GXZ4 949 aa13.63□□□□□ -0.23
CECR3-201ENST00000428828 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
CECR3-201ENST00000428828 C21orf2O43822 256 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 KCNJ4P48050 445 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 TIMM10P62072 90 aa13.62□□□□□ -0.23
CECR3-201ENST00000428828 GPSM2P81274 684 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms