RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PCDH11XQ9BZA7 1347 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 PCDH11YQ9BZA8 1340 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 MICU3Q86XE3 530 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 MYO5CQ9NQX4 1742 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 WTAPQ15007 396 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 JADE2Q9NQC1 790 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 PARD3Q8TEW0 1356 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 F8W031 263 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-208ENST00000428599 ATP2A1O14983 1001 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 CCDC77Q9BR77 488 aa10.18□□□□□ -0.78
CTNND1-208ENST00000428599 PICALMQ13492 652 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 CCDC14Q49A88 953 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 CCDC102BQ68D86 513 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
CTNND1-208ENST00000428599 TMTC2Q8N394 836 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 MEIS3Q99687 375 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 IFIT1BQ5T764 474 aaKnown RBP10.17□□□□□ -0.78
CTNND1-208ENST00000428599 NLRP3Q96P20 1036 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 ORC3Q9UBD5 711 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-208ENST00000428599 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 FAM13AO94988 1023 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 MXRA7P84157 204 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 KSR2Q6VAB6 950 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 FBF1Q8TES7 1133 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 CNNM2Q9H8M5 875 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTNND1-208ENST00000428599 TIGD1Q96MW7 591 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 HMG20BQ9P0W2 317 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTNND1-208ENST00000428599 V9GYY5 206 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-208ENST00000428599 AKR1B10O60218 316 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 DPH6Q7L8W6 267 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 ESR2Q92731 530 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 BEGAINQ9BUH8 593 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 SELENOOQ9BVL4 669 aa10.17□□□□□ -0.78
CTNND1-208ENST00000428599 GRM8O00222 908 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 STAT6P42226 847 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 HEATR3Q7Z4Q2 680 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 ARHGAP45Q92619 1136 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 ANAPC4Q9UJX5 808 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
CTNND1-208ENST00000428599 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CYP7A1P22680 504 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 TNNI2P48788 182 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 TMC6Q7Z403 805 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 FAM212AQ96EL1 285 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 SPDYE3A6NKU9 549 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CALM1P0DP23 149 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CALM2P0DP24 149 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CALM3P0DP25 149 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 MCM4P33991 863 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 MCM5P33992 734 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 MAP7D1Q3KQU3 841 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 GSTA5Q7RTV2 222 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 TMX1Q9H3N1 280 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 NOD1Q9Y239 953 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CEP83Q9Y592 693 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 EYA3Q99504 573 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 HSF2BPO75031 334 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 GAS8O95995 478 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
CTNND1-208ENST00000428599 RRAGBQ5VZM2 374 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 DDX17Q92841 729 aaKnown RBP10.16□□□□□ -0.78
CTNND1-208ENST00000428599 PHACTR3Q96KR7 559 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 NEK1Q96PY6 1258 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 CTAGE1Q96RT6 745 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 PANK2Q9BZ23 570 aa10.16□□□□□ -0.78
CTNND1-208ENST00000428599 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
CTNND1-208ENST00000428599 RNMTO43148 476 aaKnown RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 PLCG2P16885 1265 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 HAND2P61296 217 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 RBM26Q5T8P6 1007 aaKnown RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 LMBR1LQ6UX01 489 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 SLC4A4Q9Y6R1 1079 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 N4BP3O15049 544 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 ALDH1L1O75891 902 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 ZFYP08048 801 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 PSMC4P43686 418 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 NAPAP54920 295 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 BRDTQ58F21 947 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 CGNQ9P2M7 1197 aaKnown RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 EDC4Q6P2E9 1401 aaKnown RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 BIN1O00499 593 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 CEP135Q66GS9 1140 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
CTNND1-208ENST00000428599 STMN4Q9H169 189 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-208ENST00000428599 CYLC1P35663 651 aaPredicted RBP10.15□□□□□ -0.79
CTNND1-208ENST00000428599 TXNDC16Q9P2K2 825 aa10.15□□□□□ -0.79
CTNND1-208ENST00000428599 TSPOAP1O95153 1857 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms