RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 CIAPIN1Q6FI81 312 aa29.09■■■□□ 2.25
GLI3-202ENST00000428534 SMC1BQ8NDV3 1235 aa29.09■■■□□ 2.25
GLI3-202ENST00000428534 SIL1Q9H173 461 aa29.09■■■□□ 2.25
GLI3-202ENST00000428534 PNMA6EA0A0J9YXQ4 647 aa29.08■■■□□ 2.25
GLI3-202ENST00000428534 CEP85Q6P2H3 762 aa29.08■■■□□ 2.25
GLI3-202ENST00000428534 DBNDD1Q9H9R9 158 aa29.08■■■□□ 2.25
GLI3-202ENST00000428534 PUM3Q15397 648 aaKnown RBP29.07■■■□□ 2.24
GLI3-202ENST00000428534 DOK7Q18PE1 504 aa29.07■■■□□ 2.24
GLI3-202ENST00000428534 ATG9AQ7Z3C6 839 aa29.07■■■□□ 2.24
GLI3-202ENST00000428534 ZNF804AQ7Z570 1209 aa29.07■■■□□ 2.24
GLI3-202ENST00000428534 KLRG1Q96E93 195 aa29.07■■■□□ 2.24
GLI3-202ENST00000428534 GPR101Q96P66 508 aaPredicted RBP29.07■■■□□ 2.24
GLI3-202ENST00000428534 PA2G4Q9UQ80 394 aaKnown RBP29.07■■■□□ 2.24
GLI3-202ENST00000428534 ZNF541Q9H0D2 1346 aa29.06■■■□□ 2.24
GLI3-202ENST00000428534 IQCA1LA6NCM1 817 aa29.06■■■□□ 2.24
GLI3-202ENST00000428534 DDNO94850 711 aaPredicted RBP29.06■■■□□ 2.24
GLI3-202ENST00000428534 IFIT1P09914 478 aaKnown RBP29.06■■■□□ 2.24
GLI3-202ENST00000428534 VEGFAP15692 232 aaPredicted RBP29.06■■■□□ 2.24
GLI3-202ENST00000428534 CXCL9Q07325 125 aa29.06■■■□□ 2.24
GLI3-202ENST00000428534 VGLL2Q8N8G2 317 aa29.06■■■□□ 2.24
GLI3-202ENST00000428534 L3MBTL3Q96JM7 780 aaPredicted RBP29.06■■■□□ 2.24
GLI3-202ENST00000428534 AAMPQ13685 434 aa29.05■■■□□ 2.24
GLI3-202ENST00000428534 AKAP2Q9Y2D5 859 aa29.05■■■□□ 2.24
GLI3-202ENST00000428534 GJA3Q9Y6H8 435 aa29.05■■■□□ 2.24
GLI3-202ENST00000428534 COL4A5P29400 1685 aa29.05■■■□□ 2.24
GLI3-202ENST00000428534 POTECB2RU33 542 aa29.04■■■□□ 2.24
GLI3-202ENST00000428534 CAVIN4Q5BKX8 364 aa29.04■■■□□ 2.24
GLI3-202ENST00000428534 LPIN2Q92539 896 aa29.04■■■□□ 2.24
GLI3-202ENST00000428534 SLC5A1P13866 664 aa29.03■■■□□ 2.24
GLI3-202ENST00000428534 HSP90AB4PQ58FF6 505 aa29.03■■■□□ 2.24
GLI3-202ENST00000428534 YDJCA8MPS7 323 aa29.02■■■□□ 2.24
GLI3-202ENST00000428534 RAD17O75943 681 aa29.02■■■□□ 2.24
GLI3-202ENST00000428534 LMOD1P29536 600 aaPredicted RBP29.02■■■□□ 2.24
GLI3-202ENST00000428534 VPS37DQ86XT2 251 aa29.02■■■□□ 2.24
GLI3-202ENST00000428534 NOP58Q9Y2X3 529 aaKnown RBP29.02■■■□□ 2.24
GLI3-202ENST00000428534 WTIPA6NIX2 430 aaPredicted RBP29.01■■■□□ 2.23
GLI3-202ENST00000428534 SURF6O75683 361 aaKnown RBP29.01■■■□□ 2.23
GLI3-202ENST00000428534 OS9Q13438 667 aaPredicted RBP29.01■■■□□ 2.23
GLI3-202ENST00000428534 TXNRD3Q86VQ6 643 aa29.01■■■□□ 2.23
GLI3-202ENST00000428534 JMYQ8N9B5 988 aa29.01■■■□□ 2.23
GLI3-202ENST00000428534 CD209Q9NNX6 404 aa29.01■■■□□ 2.23
GLI3-202ENST00000428534 SUPT16HQ9Y5B9 1047 aaKnown RBP29.01■■■□□ 2.23
GLI3-202ENST00000428534 USP17L3A6NCW0 530 aa29■■■□□ 2.23
GLI3-202ENST00000428534 USP17L4A6NCW7 530 aa29■■■□□ 2.23
GLI3-202ENST00000428534 FGFR2P21802 821 aa29■■■□□ 2.23
GLI3-202ENST00000428534 RPS12P25398 132 aaKnown RBP29■■■□□ 2.23
GLI3-202ENST00000428534 HIBADHP31937 336 aaKnown RBP29■■■□□ 2.23
GLI3-202ENST00000428534 USP17L1Q7RTZ2 530 aa29■■■□□ 2.23
GLI3-202ENST00000428534 IRS2Q9Y4H2 1338 aa28.99■■■□□ 2.23
GLI3-202ENST00000428534 A0A1B0GUL6 1792 aa28.99■■■□□ 2.23
GLI3-202ENST00000428534 SNAP23O00161 211 aa28.99■■■□□ 2.23
GLI3-202ENST00000428534 ATP2B3Q16720 1220 aa28.99■■■□□ 2.23
GLI3-202ENST00000428534 ERC1Q8IUD2 1116 aa28.99■■■□□ 2.23
GLI3-202ENST00000428534 HACL1Q9UJ83 578 aa28.99■■■□□ 2.23
GLI3-202ENST00000428534 VIL1P09327 827 aaKnown RBP28.98■■■□□ 2.23
GLI3-202ENST00000428534 IL1R1P14778 569 aa28.98■■■□□ 2.23
GLI3-202ENST00000428534 STRIP1Q5VSL9 837 aa28.98■■■□□ 2.23
GLI3-202ENST00000428534 DPF2Q92785 391 aa28.98■■■□□ 2.23
GLI3-202ENST00000428534 PSMD14O00487 310 aa28.97■■■□□ 2.23
GLI3-202ENST00000428534 KLRK1P26718 216 aa28.97■■■□□ 2.23
GLI3-202ENST00000428534 MYO3BQ8WXR4 1341 aa28.96■■■□□ 2.23
GLI3-202ENST00000428534 MMP14P50281 582 aa28.96■■■□□ 2.23
GLI3-202ENST00000428534 FBXO33Q7Z6M2 555 aa28.96■■■□□ 2.23
GLI3-202ENST00000428534 AGBL3Q8NEM8 1001 aa28.96■■■□□ 2.23
GLI3-202ENST00000428534 FAM84BQ96KN1 310 aaPredicted RBP28.96■■■□□ 2.23
GLI3-202ENST00000428534 TFCP2Q12800 502 aa28.95■■■□□ 2.22
GLI3-202ENST00000428534 TTLL5Q6EMB2 1281 aa28.95■■■□□ 2.22
GLI3-202ENST00000428534 PNMA8AQ86V59 439 aaPredicted RBP28.95■■■□□ 2.22
GLI3-202ENST00000428534 CRBNQ96SW2 442 aa28.95■■■□□ 2.22
GLI3-202ENST00000428534 GPR108Q9NPR9 543 aa28.95■■■□□ 2.22
GLI3-202ENST00000428534 GNL3LQ9NVN8 582 aaKnown RBP28.95■■■□□ 2.22
GLI3-202ENST00000428534 SASH1O94885 1247 aa28.94■■■□□ 2.22
GLI3-202ENST00000428534 RSBN1LQ6PCB5 846 aaPredicted RBP28.94■■■□□ 2.22
GLI3-202ENST00000428534 SCN4AP35499 1836 aa28.93■■■□□ 2.22
GLI3-202ENST00000428534 GYG1P46976 350 aa28.93■■■□□ 2.22
GLI3-202ENST00000428534 GMPSP49915 693 aaPredicted RBP28.93■■■□□ 2.22
GLI3-202ENST00000428534 TDRD7Q8NHU6 1098 aaKnown RBP28.93■■■□□ 2.22
GLI3-202ENST00000428534 KCNQ5Q9NR82 932 aa28.93■■■□□ 2.22
GLI3-202ENST00000428534 ZNF609O15014 1411 aa28.93■■■□□ 2.22
GLI3-202ENST00000428534 H7C1D1 291 aa28.92■■■□□ 2.22
GLI3-202ENST00000428534 RAB11FIP3O75154 756 aa28.92■■■□□ 2.22
GLI3-202ENST00000428534 FRAT2O75474 233 aaPredicted RBP28.92■■■□□ 2.22
GLI3-202ENST00000428534 SCNN1DP51172 638 aa28.92■■■□□ 2.22
GLI3-202ENST00000428534 FKBP1AP62942 108 aaKnown RBP28.92■■■□□ 2.22
GLI3-202ENST00000428534 GPRC5DQ9NZD1 345 aa28.92■■■□□ 2.22
GLI3-202ENST00000428534 EPHX2P34913 555 aa28.91■■■□□ 2.22
GLI3-202ENST00000428534 FBXW7Q969H0 707 aa28.91■■■□□ 2.22
GLI3-202ENST00000428534 TAF1DQ9H5J8 278 aaPredicted RBP28.91■■■□□ 2.22
GLI3-202ENST00000428534 A0A1B0GUL7 405 aa28.9■■■□□ 2.22
GLI3-202ENST00000428534 ZBTB22O15209 634 aa28.9■■■□□ 2.22
GLI3-202ENST00000428534 GTF2IP78347 998 aa28.9■■■□□ 2.22
GLI3-202ENST00000428534 SIRT2Q8IXJ6 389 aa28.9■■■□□ 2.22
GLI3-202ENST00000428534 ADARB2Q9NS39 739 aaKnown RBP28.9■■■□□ 2.22
GLI3-202ENST00000428534 CNOT7Q9UIV1 285 aaKnown RBP28.9■■■□□ 2.22
GLI3-202ENST00000428534 DACT2Q5SW24 774 aa28.89■■■□□ 2.22
GLI3-202ENST00000428534 USP50Q70EL3 339 aaPredicted RBP28.89■■■□□ 2.22
GLI3-202ENST00000428534 NEUROD6Q96NK8 337 aa28.89■■■□□ 2.22
GLI3-202ENST00000428534 SEMA3EO15041 775 aa28.88■■■□□ 2.21
GLI3-202ENST00000428534 POTEIP0CG38 1075 aa28.88■■■□□ 2.21
GLI3-202ENST00000428534 POTEJP0CG39 1038 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms