RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TROQ12816 1431 aaPredicted RBP16.31■□□□□ 0.2
PTPN13-203ENST00000427191 SELENOSQ9BQE4 189 aa16.31■□□□□ 0.2
PTPN13-203ENST00000427191 GNAT2P19087 354 aa16.31■□□□□ 0.2
PTPN13-203ENST00000427191 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
PTPN13-203ENST00000427191 NUF2Q9BZD4 464 aa16.31■□□□□ 0.2
PTPN13-203ENST00000427191 ANO6Q4KMQ2 910 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 TAOK1Q7L7X3 1001 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 SRGAP1Q7Z6B7 1085 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 KIFAP3Q92845 792 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
PTPN13-203ENST00000427191 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 RPL13P26373 211 aaKnown RBP16.3■□□□□ 0.2
PTPN13-203ENST00000427191 PPP1R7Q15435 360 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 CCT6BQ92526 530 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
PTPN13-203ENST00000427191 MAK16Q9BXY0 300 aaKnown RBP16.3■□□□□ 0.2
PTPN13-203ENST00000427191 SERPINA10Q9UK55 444 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 TBC1D32Q96NH3 1257 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 NCAPGQ9BPX3 1015 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 HS2ST1Q7LGA3 356 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 PSMD1Q99460 953 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
PTPN13-203ENST00000427191 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 ZBTB43O43298 467 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
PTPN13-203ENST00000427191 NEDD9Q14511 834 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 MICU3Q86XE3 530 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-203ENST00000427191 TBC1D31Q96DN5 1066 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-203ENST00000427191 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 CCDC117Q8IWD4 279 aaPredicted RBP16.29■□□□□ 0.2
PTPN13-203ENST00000427191 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
PTPN13-203ENST00000427191 IFIT1BQ5T764 474 aaKnown RBP16.28■□□□□ 0.2
PTPN13-203ENST00000427191 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-203ENST00000427191 MYD88Q99836 296 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-203ENST00000427191 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
PTPN13-203ENST00000427191 RTN1Q16799 776 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 STK10O94804 968 aaKnown RBP16.28■□□□□ 0.2
PTPN13-203ENST00000427191 RASSF2P50749 326 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 CCDC62Q6P9F0 684 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-203ENST00000427191 PLCB1Q9NQ66 1216 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 GUCY1B3Q02153 619 aa16.28■□□□□ 0.2
PTPN13-203ENST00000427191 ATP2C2O75185 946 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 VCX3AQ9NNX9 186 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
PTPN13-203ENST00000427191 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 RAD50Q92878 1312 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 IQCDQ96DY2 449 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
PTPN13-203ENST00000427191 PPFIA2O75334 1257 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
PTPN13-203ENST00000427191 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 VPS18Q9P253 973 aa16.27■□□□□ 0.2
PTPN13-203ENST00000427191 SH3BP5O60239 455 aa16.27■□□□□ 0.19
PTPN13-203ENST00000427191 FAM13AO94988 1023 aa16.27■□□□□ 0.19
PTPN13-203ENST00000427191 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
PTPN13-203ENST00000427191 TSPY3P0CV98 308 aa16.27■□□□□ 0.19
PTPN13-203ENST00000427191 TSPY8P0CW00 308 aa16.27■□□□□ 0.19
PTPN13-203ENST00000427191 SNX21Q969T3 373 aa16.27■□□□□ 0.19
PTPN13-203ENST00000427191 RBM28Q9NW13 759 aaKnown RBP16.27■□□□□ 0.19
PTPN13-203ENST00000427191 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-203ENST00000427191 CRCPO75575 148 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 RILPL1Q5EBL4 403 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
PTPN13-203ENST00000427191 ITSN2Q9NZM3 1697 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 ASIC1P78348 528 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 RUFY4Q6ZNE9 571 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 UBL4BQ8N7F7 174 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 EPSTI1Q96J88 318 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 UTP11Q9Y3A2 253 aaKnown RBP16.26■□□□□ 0.19
PTPN13-203ENST00000427191 GNA11P29992 359 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 PLCG2P16885 1265 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 AFAP1L1Q8TED9 768 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 ZSWIM4Q9H7M6 989 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 NAA25Q14CX7 972 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 TMX1Q9H3N1 280 aa16.26■□□□□ 0.19
PTPN13-203ENST00000427191 CEP85LQ5SZL2 805 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 SLC8A3P57103 927 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 PLCB3Q01970 1234 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 PPFIA1Q13136 1202 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 GBP7Q8N8V2 638 aaPredicted RBP16.25■□□□□ 0.19
PTPN13-203ENST00000427191 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 GIPC1O14908 333 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 TTLL12Q14166 644 aaPredicted RBP16.25■□□□□ 0.19
PTPN13-203ENST00000427191 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
PTPN13-203ENST00000427191 FRMD4BQ9Y2L6 1034 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms