RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 CCDC122Q5T0U0 273 aa12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 PPP2R5CQ13362 524 aa12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 CACNA2D3Q8IZS8 1091 aa12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
POLR2J4-202ENST00000427076 INPP5BP32019 993 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 PLS1Q14651 629 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 CCT6BQ92526 530 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 KIF5AQ12840 1032 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 MAP3K12Q12852 859 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 VCX3BQ9H321 246 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 MARCKSP29966 332 aaPredicted RBP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 UBE2HP62256 183 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 PPP2R5AQ15172 486 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 BAIAP2L1Q9UHR4 511 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 F6X3S4 739 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 MCM10Q7L590 875 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 CCDC110Q8TBZ0 833 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 LRRC2Q9BYS8 371 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 NUF2Q9BZD4 464 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
POLR2J4-202ENST00000427076 EIF4E1BA6NMX2 242 aaKnown RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 GBP1P32455 592 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 MYCBPQ99417 103 aaPredicted RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 SMIM24O75264 130 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 KIF22Q14807 665 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 HINFPQ9BQA5 517 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 STX17P56962 302 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 TRMT112Q9UI30 125 aaKnown RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 ANKRD50Q9ULJ7 1429 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 OPHN1O60890 802 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 ELF2Q15723 593 aa12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
POLR2J4-202ENST00000427076 MCM7P33993 719 aa12.83□□□□□ -0.35
POLR2J4-202ENST00000427076 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.35
POLR2J4-202ENST00000427076 MX2P20592 715 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 KANK3Q6NY19 840 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 ALDH3A1P30838 453 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
POLR2J4-202ENST00000427076 UBXN1Q04323 297 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 RMND1Q9NWS8 449 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 RIOK3O14730 519 aaKnown RBP12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 FAM13AO94988 1023 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 CTAGE1Q96RT6 745 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 DHX58Q96C10 678 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 NKIRAS1Q9NYS0 192 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 CAPN7Q9Y6W3 813 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 hCG_2014768A0A024R1R8 64 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 HAUS7Q99871 368 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 TRIM4Q9C037 500 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 GPTP24298 496 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 ASIC1P78348 528 aa12.82□□□□□ -0.36
POLR2J4-202ENST00000427076 E2F4Q16254 413 aa12.81□□□□□ -0.36
POLR2J4-202ENST00000427076 GBP5Q96PP8 586 aa12.81□□□□□ -0.36
POLR2J4-202ENST00000427076 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
POLR2J4-202ENST00000427076 PLIN2Q99541 437 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms