RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
PTPRN-204ENST00000423636 BICD2Q8TD16 824 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 WWC3Q9ULE0 1092 aa14.13□□□□□ -0.15
PTPRN-204ENST00000423636 GIGYF2Q6Y7W6 1299 aaKnown RBP14.12□□□□□ -0.15
PTPRN-204ENST00000423636 PIH1D3Q9NQM4 214 aaKnown RBP14.12□□□□□ -0.15
PTPRN-204ENST00000423636 ZBTB38Q8NAP3 1195 aaPredicted RBP14.12□□□□□ -0.15
PTPRN-204ENST00000423636 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 BCAMP50895 628 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 ITPK1Q13572 414 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 SPATA32Q96LK8 384 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 DACT1Q9NYF0 836 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 ABCF2Q9UG63 623 aa14.12□□□□□ -0.15
PTPRN-204ENST00000423636 PRKAB2O43741 272 aa14.11□□□□□ -0.15
PTPRN-204ENST00000423636 MBD3O95983 291 aa14.11□□□□□ -0.15
PTPRN-204ENST00000423636 MARCH10Q8NA82 808 aaPredicted RBP14.11□□□□□ -0.15
PTPRN-204ENST00000423636 TTC12Q9H892 705 aaPredicted RBP14.11□□□□□ -0.15
PTPRN-204ENST00000423636 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTPRN-204ENST00000423636 PTMSP20962 102 aa14.11□□□□□ -0.15
PTPRN-204ENST00000423636 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
PTPRN-204ENST00000423636 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
PTPRN-204ENST00000423636 ANKRD18BA2A2Z9 1011 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 GPAA1O43292 621 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 CRKLP46109 303 aaKnown RBP14.1□□□□□ -0.15
PTPRN-204ENST00000423636 CTSWP56202 376 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 ISM2Q6H9L7 571 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 FOXP2O15409 715 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 CTDNEP1O95476 244 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 MSNP26038 577 aaKnown RBP14.1□□□□□ -0.15
PTPRN-204ENST00000423636 CTDSPL2Q05D32 466 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 ZMYM1Q5SVZ6 1142 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 C3orf67Q6ZVT6 689 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
PTPRN-204ENST00000423636 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
PTPRN-204ENST00000423636 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
PTPRN-204ENST00000423636 TM6SF1Q9BZW5 370 aa14.1□□□□□ -0.15
PTPRN-204ENST00000423636 NR1I2O75469 434 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 PHF14O94880 888 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 GTF3C6Q969F1 213 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 MPHOSPH8Q99549 860 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
PTPRN-204ENST00000423636 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 AP5Z1O43299 807 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
PTPRN-204ENST00000423636 LUZP1Q86V48 1076 aa14.09□□□□□ -0.15
PTPRN-204ENST00000423636 B4E1Z4 1266 aa14.08□□□□□ -0.15
PTPRN-204ENST00000423636 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.15
PTPRN-204ENST00000423636 UBE2HP62256 183 aa14.08□□□□□ -0.15
PTPRN-204ENST00000423636 CCDC102BQ68D86 513 aa14.08□□□□□ -0.15
PTPRN-204ENST00000423636 PIBF1Q8WXW3 757 aa14.08□□□□□ -0.15
PTPRN-204ENST00000423636 PHKBQ93100 1093 aa14.08□□□□□ -0.15
PTPRN-204ENST00000423636 ARMT1Q9H993 441 aa14.08□□□□□ -0.15
PTPRN-204ENST00000423636 KCPQ6ZWJ8 1503 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 DHX32Q7L7V1 743 aaKnown RBP14.08□□□□□ -0.16
PTPRN-204ENST00000423636 MICU3Q86XE3 530 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 RIPOR2Q9Y4F9 1068 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 KLF18A0A0U1RQI7 1052 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 hCG_1642624A0A1W2PR95 340 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 ATP2B1P20020 1258 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 KRT85P78386 507 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 EVX2Q03828 476 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 MAGEB6Q8N7X4 407 aa14.08□□□□□ -0.16
PTPRN-204ENST00000423636 ADD1P35611 737 aaKnown RBP14.07□□□□□ -0.16
PTPRN-204ENST00000423636 PGBD1Q96JS3 809 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 SRP68Q9UHB9 627 aaKnown RBP14.07□□□□□ -0.16
PTPRN-204ENST00000423636 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 LOC102724428A0A0B4J2F2 783 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 NPHP1O15259 732 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 GYG1P46976 350 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 SIK1P57059 783 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 CCDC183Q5T5S1 534 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 DCCP43146 1447 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 GOLGA8BA8MQT2 603 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 PRC1O43663 620 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 ADCY5O95622 1261 aa14.07□□□□□ -0.16
PTPRN-204ENST00000423636 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
PTPRN-204ENST00000423636 PCNTO95613 3336 aa14.06□□□□□ -0.16
PTPRN-204ENST00000423636 PDIA3P30101 505 aaKnown RBP14.06□□□□□ -0.16
PTPRN-204ENST00000423636 KCNB2Q92953 911 aa14.06□□□□□ -0.16
PTPRN-204ENST00000423636 SYAP1Q96A49 352 aaPredicted RBP14.06□□□□□ -0.16
PTPRN-204ENST00000423636 NGLY1Q96IV0 654 aa14.06□□□□□ -0.16
PTPRN-204ENST00000423636 R3HCC1Q9Y3T6 440 aaKnown RBP14.06□□□□□ -0.16
PTPRN-204ENST00000423636 BAZ2BQ9UIF8 2168 aaKnown RBP14.06□□□□□ -0.16
PTPRN-204ENST00000423636 CYP2D7A0A087X1C5 515 aa14.06□□□□□ -0.16
PTPRN-204ENST00000423636 NSUN7Q8NE18 718 aaKnown RBP14.06□□□□□ -0.16
PTPRN-204ENST00000423636 LEO1Q8WVC0 666 aaPredicted RBP14.06□□□□□ -0.16
PTPRN-204ENST00000423636 ZNF213O14771 459 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 USPL1Q5W0Q7 1092 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 TSC1Q92574 1164 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
PTPRN-204ENST00000423636 PRDM1O75626 825 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 INTS5Q6P9B9 1019 aaKnown RBP14.05□□□□□ -0.16
PTPRN-204ENST00000423636 RALYLQ86SE5 291 aaKnown RBP14.05□□□□□ -0.16
PTPRN-204ENST00000423636 SDR42E1Q8WUS8 393 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 USP28Q96RU2 1077 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 HMG20BQ9P0W2 317 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms