RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 IFT74Q96LB3 600 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 STMN1P16949 149 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 COG7P83436 770 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 TSHZ3Q63HK5 1081 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 TTC12Q9H892 705 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 MMRN2Q9H8L6 949 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 SATB1Q01826 763 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 ARHGEF2Q92974 986 aaKnown RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 DACT3Q96B18 629 aaPredicted RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
TNC-203ENST00000423613 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
TNC-203ENST00000423613 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
TNC-203ENST00000423613 CCDC38Q502W7 563 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 XAB2Q9HCS7 855 aaKnown RBP12.58□□□□□ -0.4
TNC-203ENST00000423613 MAP3K2Q9Y2U5 619 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 KIF5AQ12840 1032 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 BEGAINQ9BUH8 593 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 TLDC2A0PJX2 215 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 VEZTQ9HBM0 779 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 PSMD6Q15008 389 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 UBLCP1Q8WVY7 318 aaPredicted RBP12.58□□□□□ -0.4
TNC-203ENST00000423613 SEPT8Q92599 483 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 ZNF165P49910 485 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
TNC-203ENST00000423613 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
TNC-203ENST00000423613 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 IGHDP01880 384 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 HSP90AA4PQ58FG1 418 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 LMOD1P29536 600 aaPredicted RBP12.57□□□□□ -0.4
TNC-203ENST00000423613 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNC-203ENST00000423613 TCERG1LQ5VWI1 586 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 BAG3O95817 575 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 SYT10Q6XYQ8 523 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 SMC1BQ8NDV3 1235 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNC-203ENST00000423613 CCDC110Q8TBZ0 833 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 DDX12PQ92771 950 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
TNC-203ENST00000423613 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
TNC-203ENST00000423613 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
TNC-203ENST00000423613 NUF2Q9BZD4 464 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 NDC80O14777 642 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 ZNF131P52739 623 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 KARSQ15046 597 aaKnown RBP12.57□□□□□ -0.4
TNC-203ENST00000423613 PPP1R42Q7Z4L9 355 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 SPATS2LQ9NUQ6 558 aaKnown RBP12.57□□□□□ -0.4
TNC-203ENST00000423613 MRFAP1Q9Y605 127 aa12.57□□□□□ -0.4
TNC-203ENST00000423613 UBASH3AP57075 661 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 HAND2P61296 217 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 PRPF31Q8WWY3 499 aaKnown RBP12.56□□□□□ -0.4
TNC-203ENST00000423613 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 NDUFAB1O14561 156 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 LDHCP07864 332 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 ZNF408Q9H9D4 720 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 TOM1O60784 492 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 PTGS1P23219 599 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 RBBP5Q15291 538 aaKnown RBP12.56□□□□□ -0.4
TNC-203ENST00000423613 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 CCDC77Q9BR77 488 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 SELENOOQ9BVL4 669 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 WASLO00401 505 aaPredicted RBP12.56□□□□□ -0.4
TNC-203ENST00000423613 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
TNC-203ENST00000423613 PICALMQ13492 652 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 FERMT1Q9BQL6 677 aa12.56□□□□□ -0.4
TNC-203ENST00000423613 FAF1Q9UNN5 650 aaPredicted RBP12.56□□□□□ -0.4
TNC-203ENST00000423613 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
TNC-203ENST00000423613 TMEM110-MUSTN1A8MSY1 372 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 CETN1Q12798 172 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 GSTA5Q7RTV2 222 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 KRT28Q7Z3Y7 464 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 RNF10Q8N5U6 811 aaKnown RBP12.55□□□□□ -0.4
TNC-203ENST00000423613 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 FAM135AQ9P2D6 1515 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 TSPY2A6NKD2 308 aa12.55□□□□□ -0.4
TNC-203ENST00000423613 CETN3O15182 167 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms