RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 SPEF2Q9C093 1822 aa23.32■■□□□ 1.32
MCF2L-214ENST00000423251 EYA2O00167 538 aa23.32■■□□□ 1.32
MCF2L-214ENST00000423251 EIF6P56537 245 aaKnown RBP23.32■■□□□ 1.32
MCF2L-214ENST00000423251 LRRC24Q50LG9 513 aa23.32■■□□□ 1.32
MCF2L-214ENST00000423251 ZC3H12CQ9C0D7 883 aaKnown RBP23.32■■□□□ 1.32
MCF2L-214ENST00000423251 C1orf115Q9H7X2 142 aa23.32■■□□□ 1.32
MCF2L-214ENST00000423251 CIAO1O76071 339 aa23.31■■□□□ 1.32
MCF2L-214ENST00000423251 MAP1SQ66K74 1059 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-214ENST00000423251 HELBQ8NG08 1087 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-214ENST00000423251 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
MCF2L-214ENST00000423251 PNMA6EA0A0J9YXQ4 647 aa23.3■■□□□ 1.32
MCF2L-214ENST00000423251 TMEM88BA6NKF7 163 aa23.3■■□□□ 1.32
MCF2L-214ENST00000423251 TAF5LO75529 589 aa23.3■■□□□ 1.32
MCF2L-214ENST00000423251 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
MCF2L-214ENST00000423251 NIM1KQ8IY84 436 aa23.3■■□□□ 1.32
MCF2L-214ENST00000423251 SSH3Q8TE77 659 aa23.3■■□□□ 1.32
MCF2L-214ENST00000423251 WTIPA6NIX2 430 aaPredicted RBP23.29■■□□□ 1.32
MCF2L-214ENST00000423251 RIMBP2O15034 1052 aa23.29■■□□□ 1.32
MCF2L-214ENST00000423251 POLA2Q14181 598 aa23.29■■□□□ 1.32
MCF2L-214ENST00000423251 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
MCF2L-214ENST00000423251 KCNJ4P48050 445 aa23.28■■□□□ 1.32
MCF2L-214ENST00000423251 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
MCF2L-214ENST00000423251 CEP85Q6P2H3 762 aa23.28■■□□□ 1.32
MCF2L-214ENST00000423251 ATG9AQ7Z3C6 839 aa23.28■■□□□ 1.32
MCF2L-214ENST00000423251 RPAP2Q8IXW5 612 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-214ENST00000423251 CNTROBQ8N137 903 aa23.28■■□□□ 1.32
MCF2L-214ENST00000423251 GPR101Q96P66 508 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-214ENST00000423251 ZNRF3Q9ULT6 936 aa23.28■■□□□ 1.32
MCF2L-214ENST00000423251 PA2G4Q9UQ80 394 aaKnown RBP23.28■■□□□ 1.32
MCF2L-214ENST00000423251 PDE8BO95263 885 aa23.27■■□□□ 1.32
MCF2L-214ENST00000423251 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
MCF2L-214ENST00000423251 IL15P40933 162 aaPredicted RBP23.27■■□□□ 1.32
MCF2L-214ENST00000423251 SCNN1DP51172 638 aa23.27■■□□□ 1.32
MCF2L-214ENST00000423251 UBE4AQ14139 1066 aa23.27■■□□□ 1.32
MCF2L-214ENST00000423251 C15orf52Q6ZUT6 534 aaKnown RBP23.27■■□□□ 1.32
MCF2L-214ENST00000423251 SIL1Q9H173 461 aa23.27■■□□□ 1.32
MCF2L-214ENST00000423251 MED23Q9ULK4 1368 aa23.27■■□□□ 1.31
MCF2L-214ENST00000423251 VEGFBP49765 207 aa23.26■■□□□ 1.31
MCF2L-214ENST00000423251 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
MCF2L-214ENST00000423251 G3V3G9 751 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 SNAP23O00161 211 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 FOXN1O15353 648 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 EPS15P42566 896 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 DOK7Q18PE1 504 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 DCAF8Q5TAQ9 597 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
MCF2L-214ENST00000423251 G3BP1Q13283 466 aaKnown RBP eCLIP23.23■■□□□ 1.31
MCF2L-214ENST00000423251 TXNRD3Q86VQ6 643 aa23.23■■□□□ 1.31
MCF2L-214ENST00000423251 DBNDD1Q9H9R9 158 aa23.23■■□□□ 1.31
MCF2L-214ENST00000423251 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
MCF2L-214ENST00000423251 YDJCA8MPS7 323 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 ECE2O60344 883 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 PODNQ7Z5L7 613 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 CRBNQ96SW2 442 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 COA1Q9GZY4 146 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 IRS2Q9Y4H2 1338 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
MCF2L-214ENST00000423251 HMMRO75330 724 aa23.21■■□□□ 1.31
MCF2L-214ENST00000423251 FMR1Q06787 632 aaKnown RBP eCLIP23.21■■□□□ 1.31
MCF2L-214ENST00000423251 CXCL9Q07325 125 aa23.21■■□□□ 1.31
MCF2L-214ENST00000423251 PUM3Q15397 648 aaKnown RBP23.21■■□□□ 1.31
MCF2L-214ENST00000423251 A0A1B0GUL6 1792 aa23.2■■□□□ 1.3
MCF2L-214ENST00000423251 RASSF10A6NK89 507 aa23.2■■□□□ 1.3
MCF2L-214ENST00000423251 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
MCF2L-214ENST00000423251 FGFR2P21802 821 aa23.2■■□□□ 1.3
MCF2L-214ENST00000423251 KLRK1P26718 216 aa23.2■■□□□ 1.3
MCF2L-214ENST00000423251 TNIP1Q15025 636 aa23.2■■□□□ 1.3
MCF2L-214ENST00000423251 SIRT2Q8IXJ6 389 aa23.2■■□□□ 1.3
MCF2L-214ENST00000423251 ABT1Q9ULW3 272 aaKnown RBP23.2■■□□□ 1.3
MCF2L-214ENST00000423251 AAMPQ13685 434 aa23.19■■□□□ 1.3
MCF2L-214ENST00000423251 CIAPIN1Q6FI81 312 aa23.19■■□□□ 1.3
MCF2L-214ENST00000423251 LPIN2Q92539 896 aa23.19■■□□□ 1.3
MCF2L-214ENST00000423251 AIDAQ96BJ3 306 aa23.19■■□□□ 1.3
MCF2L-214ENST00000423251 IFIT1P09914 478 aaKnown RBP23.18■■□□□ 1.3
MCF2L-214ENST00000423251 DEFB115Q30KQ5 88 aa23.18■■□□□ 1.3
MCF2L-214ENST00000423251 USP50Q70EL3 339 aaPredicted RBP23.18■■□□□ 1.3
MCF2L-214ENST00000423251 ZNF804AQ7Z570 1209 aa23.18■■□□□ 1.3
MCF2L-214ENST00000423251 CD209Q9NNX6 404 aa23.18■■□□□ 1.3
MCF2L-214ENST00000423251 RAD17O75943 681 aa23.17■■□□□ 1.3
MCF2L-214ENST00000423251 FAM84BQ96KN1 310 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-214ENST00000423251 KCNQ5Q9NR82 932 aa23.17■■□□□ 1.3
MCF2L-214ENST00000423251 GPRC5DQ9NZD1 345 aa23.17■■□□□ 1.3
MCF2L-214ENST00000423251 AKAP2Q9Y2D5 859 aa23.17■■□□□ 1.3
MCF2L-214ENST00000423251 THSD7BQ9C0I4 1608 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 TRAF5O00463 557 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 SASH1O94885 1247 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 SLC5A1P13866 664 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 HIBADHP31937 336 aaKnown RBP23.16■■□□□ 1.3
MCF2L-214ENST00000423251 TFCP2Q12800 502 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 ATP2B3Q16720 1220 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 HSP90AB4PQ58FF6 505 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 CAVIN4Q5BKX8 364 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
MCF2L-214ENST00000423251 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
MCF2L-214ENST00000423251 IL1R1P14778 569 aa23.15■■□□□ 1.3
MCF2L-214ENST00000423251 CTCFP49711 727 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-214ENST00000423251 GMPSP49915 693 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-214ENST00000423251 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-214ENST00000423251 ADARB2Q9NS39 739 aaKnown RBP23.15■■□□□ 1.3
MCF2L-214ENST00000423251 WBP1LQ9NX94 342 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms