RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 ZC3H4Q9UPT8 1303 aaKnown RBP12.31□□□□□ -0.44
ECHDC3-203ENST00000422887 SASH1O94885 1247 aa12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 SLC5A1P13866 664 aa12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 FGFR2P21802 821 aa12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 ATP2B3Q16720 1220 aa12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 WASHC4Q2M389 1173 aa12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 ZC3H12CQ9C0D7 883 aaKnown RBP12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 POLLQ9UGP5 575 aa12.3□□□□□ -0.44
ECHDC3-203ENST00000422887 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 PPIP5K2O43314 1243 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 TAF5LO75529 589 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 YY1P25490 414 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 RASSF7Q02833 373 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 TFCP2Q12800 502 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 RHPN1Q8TCX5 695 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
ECHDC3-203ENST00000422887 ZBTB22O15209 634 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 TNNI3KQ59H18 835 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 CAVIN4Q5BKX8 364 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 ZNF804AQ7Z570 1209 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 FPGT-TNNI3KV9GXZ4 949 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
ECHDC3-203ENST00000422887 A0A1B0GUL7 405 aa12.27□□□□□ -0.45
ECHDC3-203ENST00000422887 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.45
ECHDC3-203ENST00000422887 AOC3Q16853 763 aa12.27□□□□□ -0.45
ECHDC3-203ENST00000422887 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
ECHDC3-203ENST00000422887 COA1Q9GZY4 146 aa12.27□□□□□ -0.45
ECHDC3-203ENST00000422887 G3V3G9 751 aa12.26□□□□□ -0.45
ECHDC3-203ENST00000422887 DCAF8Q5TAQ9 597 aa12.26□□□□□ -0.45
ECHDC3-203ENST00000422887 PODNQ7Z5L7 613 aa12.26□□□□□ -0.45
ECHDC3-203ENST00000422887 VPS37DQ86XT2 251 aa12.26□□□□□ -0.45
ECHDC3-203ENST00000422887 RNF181Q9P0P0 153 aa12.26□□□□□ -0.45
ECHDC3-203ENST00000422887 FOCADQ5VW36 1801 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 AK9Q5TCS8 1911 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 SEMA3EO15041 775 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 AACSQ86V21 672 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 GNL3LQ9NVN8 582 aaKnown RBP12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 PPP4R2Q9NY27 417 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 ZNRF3Q9ULT6 936 aa12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.25□□□□□ -0.45
ECHDC3-203ENST00000422887 SNAP23O00161 211 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 APBB1O00213 710 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 RIMBP2O15034 1052 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 ECE2O60344 883 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 IGHDP01880 384 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 IFIT2P09913 472 aaKnown RBP12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 IL1R1P14778 569 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 KLRK1P26718 216 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 PDS5AQ29RF7 1337 aaKnown RBP12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 CCDC158Q5M9N0 1113 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 GORABQ5T7V8 394 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 CD209Q9NNX6 404 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 IL1RAPL2Q9NP60 686 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 MYH2Q9UKX2 1941 aa12.24□□□□□ -0.45
ECHDC3-203ENST00000422887 COL1A1P02452 1464 aaPredicted RBP12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 FZD9O00144 591 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 UQCRFS1P1P0C7P4 283 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 GYG1P46976 350 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 TIMM10P62072 90 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 ANKRD45Q5TZF3 282 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 TXNRD3Q86VQ6 643 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 DBNDD1Q9H9R9 158 aa12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
ECHDC3-203ENST00000422887 MYO3BQ8WXR4 1341 aa12.22□□□□□ -0.45
ECHDC3-203ENST00000422887 NUCB1Q02818 461 aa12.22□□□□□ -0.45
ECHDC3-203ENST00000422887 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
ECHDC3-203ENST00000422887 TDRD7Q8NHU6 1098 aaKnown RBP12.22□□□□□ -0.45
ECHDC3-203ENST00000422887 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
ECHDC3-203ENST00000422887 FAM205AQ6ZU69 1335 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 YDJCA8MPS7 323 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 FRAT2O75474 233 aaPredicted RBP12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 ADORA1P30542 326 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 FKBP1AP62942 108 aaKnown RBP12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 TNIP1Q15025 636 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 TTC39AQ5SRH9 613 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms