RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 DDX19BQ9UMR2 479 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
SEC23B-205ENST00000422877 WTIPA6NIX2 430 aaPredicted RBP17.25■□□□□ 0.35
SEC23B-205ENST00000422877 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
SEC23B-205ENST00000422877 PDE8BO95263 885 aa17.25■□□□□ 0.35
SEC23B-205ENST00000422877 RPS12P25398 132 aaKnown RBP17.25■□□□□ 0.35
SEC23B-205ENST00000422877 LMOD1P29536 600 aaPredicted RBP17.25■□□□□ 0.35
SEC23B-205ENST00000422877 SCNN1DP51172 638 aa17.25■□□□□ 0.35
SEC23B-205ENST00000422877 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
SEC23B-205ENST00000422877 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 RAD17O75943 681 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 C1QTNF8P60827 252 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 METTL24Q5JXM2 366 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 DPF2Q92785 391 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 TAF1DQ9H5J8 278 aaPredicted RBP17.24■□□□□ 0.35
SEC23B-205ENST00000422877 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
SEC23B-205ENST00000422877 PSMD14O00487 310 aa17.23■□□□□ 0.35
SEC23B-205ENST00000422877 PLIN1O60240 522 aa17.23■□□□□ 0.35
SEC23B-205ENST00000422877 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
SEC23B-205ENST00000422877 EPHX2P34913 555 aa17.23■□□□□ 0.35
SEC23B-205ENST00000422877 IL15P40933 162 aaPredicted RBP17.23■□□□□ 0.35
SEC23B-205ENST00000422877 ATG9AQ7Z3C6 839 aa17.23■□□□□ 0.35
SEC23B-205ENST00000422877 ZNF804AQ7Z570 1209 aa17.23■□□□□ 0.35
SEC23B-205ENST00000422877 PNMA8AQ86V59 439 aaPredicted RBP17.23■□□□□ 0.35
SEC23B-205ENST00000422877 KLRK1P26718 216 aa17.22■□□□□ 0.35
SEC23B-205ENST00000422877 FSTL1Q12841 308 aa17.22■□□□□ 0.35
SEC23B-205ENST00000422877 PUM3Q15397 648 aaKnown RBP17.22■□□□□ 0.35
SEC23B-205ENST00000422877 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 PNMA6EA0A0J9YXQ4 647 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 USP17L3A6NCW0 530 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 USP17L4A6NCW7 530 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 SNAP23O00161 211 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 IL1R1P14778 569 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 FGFR2P21802 821 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
SEC23B-205ENST00000422877 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 POLA2Q14181 598 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 STRIP1Q5VSL9 837 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 USP17L1Q7RTZ2 530 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 SMC1BQ8NDV3 1235 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 AGBL3Q8NEM8 1001 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 SSH3Q8TE77 659 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 COG6Q9Y2V7 657 aa17.21■□□□□ 0.35
SEC23B-205ENST00000422877 RSBN1LQ6PCB5 846 aaPredicted RBP17.2■□□□□ 0.34
SEC23B-205ENST00000422877 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
SEC23B-205ENST00000422877 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
SEC23B-205ENST00000422877 SIL1Q9H173 461 aa17.2■□□□□ 0.34
SEC23B-205ENST00000422877 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
SEC23B-205ENST00000422877 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
SEC23B-205ENST00000422877 PA2G4Q9UQ80 394 aaKnown RBP17.2■□□□□ 0.34
SEC23B-205ENST00000422877 IFIT1P09914 478 aaKnown RBP17.19■□□□□ 0.34
SEC23B-205ENST00000422877 EPS15P42566 896 aa17.19■□□□□ 0.34
SEC23B-205ENST00000422877 MMP14P50281 582 aa17.19■□□□□ 0.34
SEC23B-205ENST00000422877 LPIN2Q92539 896 aa17.19■□□□□ 0.34
SEC23B-205ENST00000422877 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
SEC23B-205ENST00000422877 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
SEC23B-205ENST00000422877 H7C1D1 291 aa17.18■□□□□ 0.34
SEC23B-205ENST00000422877 RRP1P56182 461 aaKnown RBP17.18■□□□□ 0.34
SEC23B-205ENST00000422877 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
SEC23B-205ENST00000422877 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
SEC23B-205ENST00000422877 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
SEC23B-205ENST00000422877 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
SEC23B-205ENST00000422877 GMLQ99445 158 aa17.18■□□□□ 0.34
SEC23B-205ENST00000422877 C1orf115Q9H7X2 142 aa17.18■□□□□ 0.34
SEC23B-205ENST00000422877 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
SEC23B-205ENST00000422877 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
SEC23B-205ENST00000422877 ZBTB22O15209 634 aa17.17■□□□□ 0.34
SEC23B-205ENST00000422877 SLC5A1P13866 664 aa17.17■□□□□ 0.34
SEC23B-205ENST00000422877 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
SEC23B-205ENST00000422877 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
SEC23B-205ENST00000422877 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
SEC23B-205ENST00000422877 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
SEC23B-205ENST00000422877 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
SEC23B-205ENST00000422877 SASH1O94885 1247 aa17.16■□□□□ 0.34
SEC23B-205ENST00000422877 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
SEC23B-205ENST00000422877 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
SEC23B-205ENST00000422877 FBXO33Q7Z6M2 555 aa17.16■□□□□ 0.34
SEC23B-205ENST00000422877 MICALL2Q8IY33 904 aa17.16■□□□□ 0.34
SEC23B-205ENST00000422877 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
SEC23B-205ENST00000422877 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
SEC23B-205ENST00000422877 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
SEC23B-205ENST00000422877 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 GYG1P46976 350 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
SEC23B-205ENST00000422877 GTF2IP78347 998 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 G3BP1Q13283 466 aaKnown RBP eCLIP17.15■□□□□ 0.343e-6■■■□□ 16.1
SEC23B-205ENST00000422877 EAPPQ56P03 285 aaPredicted RBP17.15■□□□□ 0.34
SEC23B-205ENST00000422877 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
SEC23B-205ENST00000422877 AKAP2Q9Y2D5 859 aa17.15■□□□□ 0.34
SEC23B-205ENST00000422877 HMMRO75330 724 aa17.13■□□□□ 0.33
SEC23B-205ENST00000422877 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
SEC23B-205ENST00000422877 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
SEC23B-205ENST00000422877 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
SEC23B-205ENST00000422877 MYH2Q9UKX2 1941 aa17.12■□□□□ 0.33
SEC23B-205ENST00000422877 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms