RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 ACSBG1Q96GR2 724 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-202ENST00000422785 RREB1Q92766 1687 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 ZAP70P43403 619 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 SIK1P57059 783 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 UBE2HP62256 183 aa16.35■□□□□ 0.21
CDCA3-202ENST00000422785 STK3Q13188 491 aa16.35■□□□□ 0.21
CDCA3-202ENST00000422785 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
CDCA3-202ENST00000422785 LAMA4Q16363 1823 aa16.35■□□□□ 0.21
CDCA3-202ENST00000422785 SLIT2O94813 1529 aa16.35■□□□□ 0.21
CDCA3-202ENST00000422785 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-202ENST00000422785 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-202ENST00000422785 PDE8BO95263 885 aa16.35■□□□□ 0.21
CDCA3-202ENST00000422785 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-202ENST00000422785 ANP32BQ92688 251 aaKnown RBP16.35■□□□□ 0.21
CDCA3-202ENST00000422785 A0A0G2JS52 829 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 E7EWF7 191 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
CDCA3-202ENST00000422785 CCDC173Q0VFZ6 552 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 LRP5O75197 1615 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 PHF14O94880 888 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
CDCA3-202ENST00000422785 APPBP2Q92624 585 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
CDCA3-202ENST00000422785 HSP90B1P14625 803 aaKnown RBP16.33■□□□□ 0.21
CDCA3-202ENST00000422785 MCAMP43121 646 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 ITPK1Q13572 414 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 WASHC4Q2M389 1173 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 SUSD4Q5VX71 490 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 BRF1Q92994 677 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 PPP1R9BQ96SB3 815 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.21
CDCA3-202ENST00000422785 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
CDCA3-202ENST00000422785 FIBPO43427 364 aa16.33■□□□□ 0.2
CDCA3-202ENST00000422785 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
CDCA3-202ENST00000422785 FGD1P98174 961 aa16.33■□□□□ 0.2
CDCA3-202ENST00000422785 CDC37L1Q7L3B6 337 aa16.33■□□□□ 0.2
CDCA3-202ENST00000422785 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
CDCA3-202ENST00000422785 PFKFB2O60825 505 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
CDCA3-202ENST00000422785 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDCA3-202ENST00000422785 MYH7P12883 1935 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
CDCA3-202ENST00000422785 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
CDCA3-202ENST00000422785 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 FOXP2O15409 715 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 LLPHQ9BRT6 129 aaKnown RBP16.32■□□□□ 0.2
CDCA3-202ENST00000422785 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
CDCA3-202ENST00000422785 PUM3Q15397 648 aaKnown RBP16.31■□□□□ 0.2
CDCA3-202ENST00000422785 LPIN2Q92539 896 aa16.31■□□□□ 0.2
CDCA3-202ENST00000422785 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-202ENST00000422785 FGFR2P21802 821 aa16.31■□□□□ 0.2
CDCA3-202ENST00000422785 ARID4AP29374 1257 aaPredicted RBP16.31■□□□□ 0.2
CDCA3-202ENST00000422785 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
CDCA3-202ENST00000422785 TTLL5Q6EMB2 1281 aa16.31■□□□□ 0.2
CDCA3-202ENST00000422785 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
CDCA3-202ENST00000422785 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
CDCA3-202ENST00000422785 TOM1O60784 492 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 KRT85P78386 507 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 SCRN1Q12765 414 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 FBXL16Q8N461 479 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-202ENST00000422785 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
CDCA3-202ENST00000422785 JAK2O60674 1132 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
CDCA3-202ENST00000422785 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 TSPY26PQ9H489 355 aa16.3■□□□□ 0.2
CDCA3-202ENST00000422785 LETM1O95202 739 aaPredicted RBP16.29■□□□□ 0.2
CDCA3-202ENST00000422785 FGAP02671 866 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 ADD2P35612 726 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 ARAP2Q8WZ64 1704 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 GPAA1O43292 621 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 ATRNO75882 1429 aa16.29■□□□□ 0.2
CDCA3-202ENST00000422785 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 ELP1O95163 1332 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 PHKA1P46020 1223 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 ZNF274Q96GC6 653 aaPredicted RBP16.28■□□□□ 0.2
CDCA3-202ENST00000422785 NTSR2O95665 410 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 MPHOSPH8Q99549 860 aa16.28■□□□□ 0.2
CDCA3-202ENST00000422785 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDCA3-202ENST00000422785 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
CDCA3-202ENST00000422785 FAM177BA6PVY3 158 aa16.27■□□□□ 0.2
CDCA3-202ENST00000422785 KCNQ2O43526 872 aa16.27■□□□□ 0.2
CDCA3-202ENST00000422785 NSUN7Q8NE18 718 aaKnown RBP16.27■□□□□ 0.2
CDCA3-202ENST00000422785 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.2
CDCA3-202ENST00000422785 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
CDCA3-202ENST00000422785 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms